RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NEU3Q9UQ49 428 aa8.84□□□□□ -0.99
UFD1-205ENST00000459854 SLC17A2O00624 439 aa8.83□□□□□ -1
UFD1-205ENST00000459854 SUSD5O60279 629 aa8.83□□□□□ -1
UFD1-205ENST00000459854 PCMT1P22061 227 aa8.83□□□□□ -1
UFD1-205ENST00000459854 SOWAHCQ53LP3 525 aaPredicted RBP8.83□□□□□ -1
UFD1-205ENST00000459854 COX20Q5RI15 118 aa8.83□□□□□ -1
UFD1-205ENST00000459854 TMEM201Q5SNT2 666 aa8.83□□□□□ -1
UFD1-205ENST00000459854 PRR27Q6MZM9 219 aa8.83□□□□□ -1
UFD1-205ENST00000459854 MFSD12Q6NUT3 480 aa8.83□□□□□ -1
UFD1-205ENST00000459854 MEX3DQ86XN8 651 aaKnown RBP8.83□□□□□ -1
UFD1-205ENST00000459854 NLGN4XQ8N0W4 816 aa8.83□□□□□ -1
UFD1-205ENST00000459854 PLPP7Q8NBV4 271 aa8.83□□□□□ -1
UFD1-205ENST00000459854 GJC3Q8NFK1 279 aa8.83□□□□□ -1
UFD1-205ENST00000459854 DYRK2Q92630 601 aa8.83□□□□□ -1
UFD1-205ENST00000459854 SLC35E1Q96K37 410 aa8.83□□□□□ -1
UFD1-205ENST00000459854 HINT3Q9NQE9 182 aaKnown RBP8.83□□□□□ -1
UFD1-205ENST00000459854 MCTS1Q9ULC4 181 aaKnown RBP8.83□□□□□ -1
UFD1-205ENST00000459854 PYCARD-AS1I3L0S3 204 aa8.83□□□□□ -1
UFD1-205ENST00000459854 FXYD1O00168 92 aa8.83□□□□□ -1
UFD1-205ENST00000459854 CSN1S1P47710 185 aa8.83□□□□□ -1
UFD1-205ENST00000459854 SLC48A1Q6P1K1 146 aa8.83□□□□□ -1
UFD1-205ENST00000459854 Q6ZSR6 202 aa8.83□□□□□ -1
UFD1-205ENST00000459854 HSD11B1LQ7Z5J1 315 aa8.83□□□□□ -1
UFD1-205ENST00000459854 CALHM3Q86XJ0 350 aa8.83□□□□□ -1
UFD1-205ENST00000459854 PRR18Q8N4B5 295 aa8.83□□□□□ -1
UFD1-205ENST00000459854 WFIKKN1Q96NZ8 548 aa8.83□□□□□ -1
UFD1-205ENST00000459854 CLCF1Q9UBD9 225 aa8.83□□□□□ -1
UFD1-205ENST00000459854 NAT8Q9UHE5 227 aa8.83□□□□□ -1
UFD1-205ENST00000459854 SPINT2O43291 252 aa8.83□□□□□ -1
UFD1-205ENST00000459854 QDPRP09417 244 aa8.83□□□□□ -1
UFD1-205ENST00000459854 CD200P41217 278 aa8.83□□□□□ -1
UFD1-205ENST00000459854 CRYBB2P43320 205 aa8.83□□□□□ -1
UFD1-205ENST00000459854 GSK3AP49840 483 aa8.83□□□□□ -1
UFD1-205ENST00000459854 RPL27P61353 136 aaKnown RBP8.83□□□□□ -1
UFD1-205ENST00000459854 ZNF273Q14593 569 aa8.83□□□□□ -1
UFD1-205ENST00000459854 ZNF343Q6P1L6 599 aa8.83□□□□□ -1
UFD1-205ENST00000459854 Q6ZN92 141 aa8.83□□□□□ -1
UFD1-205ENST00000459854 THNSL2Q86YJ6 484 aa8.83□□□□□ -1
UFD1-205ENST00000459854 MMP21Q8N119 569 aa8.83□□□□□ -1
UFD1-205ENST00000459854 NECAP1Q8NC96 275 aa8.83□□□□□ -1
UFD1-205ENST00000459854 MRPL22Q9NWU5 206 aaKnown RBP8.83□□□□□ -1
UFD1-205ENST00000459854 FKBP11Q9NYL4 201 aa8.83□□□□□ -1
UFD1-205ENST00000459854 WSB2Q9NYS7 404 aaPredicted RBP8.83□□□□□ -1
UFD1-205ENST00000459854 APOBEC3BQ9UH17 382 aaKnown RBP8.83□□□□□ -1
UFD1-205ENST00000459854 PRSS21Q9Y6M0 314 aa8.83□□□□□ -1
UFD1-205ENST00000459854 ZIC2O95409 532 aaPredicted RBP8.83□□□□□ -1
UFD1-205ENST00000459854 CD99P14209 185 aa8.83□□□□□ -1
UFD1-205ENST00000459854 MSX1P28360 303 aa8.83□□□□□ -1
UFD1-205ENST00000459854 EIF1P41567 113 aaKnown RBP8.83□□□□□ -1
UFD1-205ENST00000459854 CLDN23Q96B33 292 aa8.83□□□□□ -1
UFD1-205ENST00000459854 NMES1Q9C002 83 aa8.83□□□□□ -1
UFD1-205ENST00000459854 PEX11BO96011 259 aa8.82□□□□□ -1
UFD1-205ENST00000459854 NRASP01111 189 aa8.82□□□□□ -1
UFD1-205ENST00000459854 HRASP01112 189 aa8.82□□□□□ -1
UFD1-205ENST00000459854 KRASP01116 189 aa8.82□□□□□ -1
UFD1-205ENST00000459854 INHBBP09529 407 aa8.82□□□□□ -1
UFD1-205ENST00000459854 SLC35E2P0CK97 266 aa8.82□□□□□ -1
UFD1-205ENST00000459854 IL3RAP26951 378 aa8.82□□□□□ -1
UFD1-205ENST00000459854 TCTAP57738 103 aa8.82□□□□□ -1
UFD1-205ENST00000459854 PAFAH1B2P68402 229 aa8.82□□□□□ -1
UFD1-205ENST00000459854 ELOBQ15370 118 aa8.82□□□□□ -1
UFD1-205ENST00000459854 PHLDA2Q53GA4 152 aa8.82□□□□□ -1
UFD1-205ENST00000459854 ACSM5Q6NUN0 579 aa8.82□□□□□ -1
UFD1-205ENST00000459854 SEZ6L2Q6UXD5 910 aa8.82□□□□□ -1
UFD1-205ENST00000459854 LHFPL2Q6ZUX7 228 aa8.82□□□□□ -1
UFD1-205ENST00000459854 TMPRSS11FQ6ZWK6 438 aa8.82□□□□□ -1
UFD1-205ENST00000459854 ZNF738Q8NE65 137 aa8.82□□□□□ -1
UFD1-205ENST00000459854 OR10A7Q8NGE5 316 aa8.82□□□□□ -1
UFD1-205ENST00000459854 PDCD1LG2Q9BQ51 273 aa8.82□□□□□ -1
UFD1-205ENST00000459854 GLIPR2Q9H4G4 154 aa8.82□□□□□ -1
UFD1-205ENST00000459854 NXT1Q9UKK6 140 aaKnown RBP8.82□□□□□ -1
UFD1-205ENST00000459854 SFT2D2O95562 160 aa8.82□□□□□ -1
UFD1-205ENST00000459854 DUS4LO95620 317 aaKnown RBP8.82□□□□□ -1
UFD1-205ENST00000459854 COL9A1P20849 921 aa8.82□□□□□ -1
UFD1-205ENST00000459854 DCTDP32321 178 aa8.82□□□□□ -1
UFD1-205ENST00000459854 CNN1P51911 297 aaKnown RBP8.82□□□□□ -1
UFD1-205ENST00000459854 DUSP8Q13202 625 aa8.82□□□□□ -1
UFD1-205ENST00000459854 SQSTM1Q13501 440 aa8.82□□□□□ -1
UFD1-205ENST00000459854 RTL8BQ17RB0 113 aa8.82□□□□□ -1
UFD1-205ENST00000459854 DPPA3Q6W0C5 159 aa8.82□□□□□ -1
UFD1-205ENST00000459854 TEX37Q96LM6 180 aa8.82□□□□□ -1
UFD1-205ENST00000459854 PARP11Q9NR21 331 aa8.82□□□□□ -1
UFD1-205ENST00000459854 RARRES3Q9UL19 164 aa8.82□□□□□ -1
UFD1-205ENST00000459854 LOC107986453A0A1B0GWG9 222 aa8.82□□□□□ -1
UFD1-205ENST00000459854 METTL12A8MUP2 240 aa8.82□□□□□ -1
UFD1-205ENST00000459854 TUSC2O75896 110 aa8.82□□□□□ -1
UFD1-205ENST00000459854 SLCO2B1O94956 709 aa8.82□□□□□ -1
UFD1-205ENST00000459854 F13BP05160 661 aa8.82□□□□□ -1
UFD1-205ENST00000459854 CRYBA1P05813 215 aa8.82□□□□□ -1
UFD1-205ENST00000459854 NID1P14543 1247 aa8.82□□□□□ -1
UFD1-205ENST00000459854 AKR1C3P42330 323 aa8.82□□□□□ -1
UFD1-205ENST00000459854 NHLH2Q02577 135 aa8.82□□□□□ -1
UFD1-205ENST00000459854 CD300LDQ6UXZ3 194 aa8.82□□□□□ -1
UFD1-205ENST00000459854 FA2HQ7L5A8 372 aa8.82□□□□□ -1
UFD1-205ENST00000459854 OR5M1Q8NGP8 315 aa8.82□□□□□ -1
UFD1-205ENST00000459854 TRIB1Q96RU8 372 aa8.82□□□□□ -1
UFD1-205ENST00000459854 RAB40CQ96S21 281 aa8.82□□□□□ -1
UFD1-205ENST00000459854 STRADBQ9C0K7 418 aa8.82□□□□□ -1
UFD1-205ENST00000459854 C6orf106Q9H6K1 298 aaPredicted RBP8.82□□□□□ -1
UFD1-205ENST00000459854 MANBALQ9NQG1 85 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms