RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 LDLRAD4O15165 306 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF264O43296 627 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 HRH1P35367 487 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 DNASE1L1P49184 302 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 RAB5BP61020 215 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 NAAAQ02083 359 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 HABP2Q14520 560 aaPredicted RBP15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 ROBO4Q8WZ75 1007 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 RNF126Q9BV68 326 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 RHOFQ9HBH0 211 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 OR2S2Q9NQN1 319 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 ASPMQ8IZT6 3477 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 WIPF3A6NGB9 483 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 EFSO43281 561 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 TSPAN2O60636 221 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 OR6A2O95222 327 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 NUDT14O95848 222 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 FGF5P12034 268 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 IGFBP3P17936 291 aaPredicted RBP15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 FBXW4P57775 412 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 TEX30Q5JUR7 227 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 MR1Q95460 341 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 TRAV20A0A0B4J274 112 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 MSGN1A6NI15 193 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 VSTM2BA6NLU5 285 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 COLCA2A8K830 154 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 H0YIZ8 118 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 XKRYO14609 159 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 DUS4LO95620 317 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 SLC18B1Q6NT16 456 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF585AQ6P3V2 769 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF441Q8N8Z8 693 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 OR4D6Q8NGJ1 314 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 OR13C3Q8NGS6 347 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 AQP3Q92482 292 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 TAAR8Q969N4 342 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 LPAR3Q9UBY5 353 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 CACNA1HO95180 2353 aa15.25■□□□□ 0.03
SCAMP4-201ENST00000316097 A0A0A6YYH2 397 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 TRBV11-1A0A0K0K1C0 115 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 A6NJ64 397 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 CELA2AP08217 269 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF440Q8IYI8 595 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF563Q8TA94 476 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 CDX4O14627 284 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 S100A9P06702 114 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 RIDAP52758 137 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 PNLIPRP3Q17RR3 467 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF260Q3ZCT1 412 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 TMEM200AQ86VY9 491 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 BHLHE23Q8NDY6 225 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 ASB17Q8WXJ9 295 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 FAM46BQ96A09 425 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 TBL1XR1Q9BZK7 514 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 FN3KRPQ9HA64 309 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 GDF2Q9UK05 429 aaPredicted RBP15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 B3GALT1Q9Y5Z6 326 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 PCNX3Q9H6A9 2034 aa15.24■□□□□ 0.03
SCAMP4-201ENST00000316097 LMX1BO60663 402 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 SFTA3P0C7M3 94 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 FSTP19883 344 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 IL11RAQ14626 422 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 MRPL14Q6P1L8 145 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 CPEB2Q7Z5Q1 589 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 CATSPERDQ86XM0 798 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 MISPQ8IVT2 679 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 FAM219AQ8IW50 185 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 OR6S1Q8NH40 331 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 NUBPLQ8TB37 319 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 MARCH1Q8TCQ1 289 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 MRPL22Q9NWU5 206 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 LRP12Q9Y561 859 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 TRBV6-7A0A0A0MS04 114 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 RAB27BO00194 218 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 SLC16A7O60669 478 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 IFNA6P05013 189 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 SMIM6P0DI80 62 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 DCAF7P61962 342 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 SMCO1Q147U7 214 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 FAHD2BQ6P2I3 314 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 DRAM2Q6UX65 266 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 ETV3LQ6ZN32 361 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 FAHD2AQ96GK7 314 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 CCNL2Q96S94 520 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 GSN-AS1Q9NRJ2 163 aa15.23■□□□□ 0.03
SCAMP4-201ENST00000316097 METTL21EPA6NDL7 271 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 DBX1A6NMT0 343 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 AGPAT2O15120 278 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 ECH1Q13011 328 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 C1QL3Q5VWW1 255 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 DBX2Q6ZNG2 339 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 C14orf79Q96F83 325 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 NMES1Q9C002 83 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 NIT2Q9NQR4 276 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 EMC9Q9Y3B6 208 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 PMP2P02689 132 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 S100A6P06703 90 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 ACP1P24666 158 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 AKR1C3P42330 323 aa15.22■□□□□ 0.03
SCAMP4-201ENST00000316097 CAV2P51636 162 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms