RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 TRIM64BA6NI03 449 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 XRCC2O43543 280 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 SYT7O43581 403 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 IL1AP01583 271 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 IGKV3-15P01624 115 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 TTRP02766 147 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 LCATP04180 440 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 OCM2P0CE71 109 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 RANBP1P43487 201 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 KIR3DL2P43630 455 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 ASCL1P50553 236 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 PSMD7P51665 324 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 VBP1P61758 197 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 RPS11P62280 158 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 LSM3P62310 102 aaKnown RBP7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 TFF3Q07654 80 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 MFGE8Q08431 387 aaPredicted RBP7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 FAM27E3Q08E93 113 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 MALLQ13021 153 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 FBXL19-AS1Q494R0 122 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 ZMAT1Q5H9K5 638 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 FOXB2Q5VYV0 432 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 TMEM91Q6ZNR0 172 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 FAM57BQ71RH2 274 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 DOK3Q7L591 496 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 PRSS45Q7RTY3 260 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 MDP1Q86V88 176 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 TMEM200AQ86VY9 491 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 TPRA1Q86W33 373 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 LIX1LQ8IVB5 337 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 PLPP7Q8NBV4 271 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 SLC30A7Q8NEW0 376 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 APOBEC3DQ96AK3 386 aaPredicted RBP7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 C10orf35Q96D05 121 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 POM121L2Q96KW2 1035 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 ZNF75AQ96N20 296 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 CENPOQ9BU64 300 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 MED18Q9BUE0 208 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 C1QTNF5Q9BXJ0 243 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 NAA50Q9GZZ1 169 aaKnown RBP7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 SLITRK2Q9H156 845 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 LIME1Q9H400 295 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 OPA3Q9H6K4 179 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 NGBQ9NPG2 151 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 TBCCD1Q9NVR7 557 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 CRNNQ9UBG3 495 aaPredicted RBP7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 DHDHQ9UQ10 334 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 SLC25A15Q9Y619 301 aa7.16□□□□□ -1.26
SMARCAL1-206ENST00000427645 CACNA1CQ13936 2221 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 DNHD1Q96M86 4753 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 LOC100509620A0A075B734 347 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 TRAV1-2A0A0B4J238 106 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 TRBV5-5A0A0J9YX44 114 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 LOC390937A0A1W2PQ73 354 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 C5orf49A4QMS7 147 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 MEGF11A6BM72 1044 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 DHRS7CA6NNS2 312 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 PDCD5O14737 125 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 TBX1O43435 398 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 TMEM127O75204 238 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 ATE1O95260 518 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 DBHP09172 617 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 UCHL1P09936 223 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 ZNF14P17017 642 aaPredicted RBP7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 SRMP19623 302 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 CCNOP22674 350 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 NR4A1P22736 598 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 MYL9P24844 172 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 APEX1P27695 318 aaKnown RBP7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 PCSK6P29122 969 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 SOX6P35712 828 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 RAD52P43351 418 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 MTNR1BP49286 362 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 RORCP51449 518 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 PPA1Q15181 289 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 DGUOKQ16854 277 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 CNPY1Q3B7I2 92 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 HSD17B12Q53GQ0 312 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 C22orf42Q6IC83 251 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 COLCA1Q6ZS62 124 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 Q6ZSR3 168 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 NAA40Q86UY6 237 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 ZNF584Q8IVC4 421 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 CROCCP3Q8IVE0 287 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 SERPINA12Q8IW75 414 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 RDH10Q8IZV5 341 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 RELL2Q8NC24 303 aaPredicted RBP7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 TSEN15Q8WW01 171 aaKnown RBP7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 SLC7A6Q92536 515 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 AKAP1Q92667 903 aaKnown RBP eCLIP7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 RPL3LQ92901 407 aaKnown RBP7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 RNASE6Q93091 150 aaKnown RBP7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 PPP1R14AQ96A00 147 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 SGK3Q96BR1 496 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 S100PBPQ96BU1 408 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 ACTR6Q9GZN1 396 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 DCSTAMPQ9H295 470 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 CDH20Q9HBT6 801 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 TCF7L1Q9HCS4 588 aa7.15□□□□□ -1.26
SMARCAL1-206ENST00000427645 KCNJ16Q9NPI9 418 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms