RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 H7C1Q1 480 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 PPIHO43447 177 aaKnown RBP12.37□□□□□ -0.43
SF1-202ENST00000334944 AIMP2Q13155 320 aaKnown RBP12.37□□□□□ -0.43
SF1-202ENST00000334944 NKPD1Q17RQ9 610 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 ZNF813Q6ZN06 617 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 ACOT7LQ6ZUV0 252 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 LIPHQ8WWY8 451 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 SLC41A2Q96JW4 573 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 SMOC1Q9H4F8 434 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 PHF3Q92576 2039 aaKnown RBP12.37□□□□□ -0.43
SF1-202ENST00000334944 C13orf42A0A1B0GVH6 325 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 HEXAP06865 529 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 ACKR3P25106 362 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 SLC6A8P48029 635 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
SF1-202ENST00000334944 OR10K2Q6IF99 312 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 OTOSQ8NHW6 89 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 HAVCR1Q96D42 359 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 STEAP1Q9UHE8 339 aa12.37□□□□□ -0.43
SF1-202ENST00000334944 URB1O60287 2271 aaKnown RBP12.37□□□□□ -0.43
SF1-202ENST00000334944 M0R036 132 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 SNAPC5O75971 98 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 OR2F2O95006 317 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 SLC34A2O95436 690 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 TXNDC12O95881 172 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 AGAP20933 346 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 CD34P28906 385 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 HTR5AP47898 357 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 RPL27P61353 136 aaKnown RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 OR2F1Q13607 317 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 LCN10Q6JVE6 187 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 INO80EQ8NBZ0 244 aaPredicted RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 SECTM1Q8WVN6 248 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 MVB12AQ96EY5 273 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 COMMD4Q9H0A8 199 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 PISDQ9UG56 409 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 MRPS17Q9Y2R5 130 aaKnown RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 IGKV1D-43A0A0B4J1Z2 117 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 LMX1BO60663 402 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 IGHV2-5P01817 119 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 SERPINA5P05154 406 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 NR2C1P13056 603 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 ITGA3P26006 1051 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 G0S2P27469 103 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 FAUP35544 74 aaKnown RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 MECP2P51608 486 aaKnown RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 HGFACQ04756 655 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 CHAF1BQ13112 559 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 SHBQ15464 509 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 MST1LQ2TV78 715 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 DND1Q8IYX4 353 aaKnown RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 OR6N1Q8NGY5 312 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 MISP3Q96FF7 219 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 RAB33BQ9H082 229 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 RNF122Q9H9V4 155 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 FN3KRPQ9HA64 309 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 LOC101059948A0A1B0GTJ6 334 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 RNASEK-C17orf49H0YIS7 233 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 STMND1H3BQB6 276 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 AP4M1O00189 453 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 SLC31A2O15432 143 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 ALOX12BO75342 701 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 AHSA1O95433 338 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 HLA-AP01891 365 aaKnown RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 HEXBP07686 556 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 RCC1P18754 421 aaPredicted RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 POLR2HP52434 150 aaKnown RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 PJVKQ0ZLH3 352 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 DHRS2Q13268 280 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 EIF2B1Q14232 305 aaKnown RBP12.36□□□□□ -0.43
SF1-202ENST00000334944 CLEC9AQ6UXN8 241 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 BIVMQ86UB2 503 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 APCDD1LQ8NCL9 501 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 ROBO4Q8WZ75 1007 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 POM121Q96HA1 1249 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 C4orf45Q96LM5 186 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 LURAP1Q96LR2 239 aa12.36□□□□□ -0.43
SF1-202ENST00000334944 NCOR1O75376 2440 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 TRBV11-1A0A0K0K1C0 115 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 ARGFXA6NJG6 315 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 IFITM10A6NMD0 228 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 H7C417 338 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 GLSO94925 669 aaPredicted RBP12.35□□□□□ -0.43
SF1-202ENST00000334944 ITGA5P08648 1049 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 CD96P40200 585 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 PRKXP51817 358 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 USF2Q15853 346 aaPredicted RBP12.35□□□□□ -0.43
SF1-202ENST00000334944 SGCBQ16585 318 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 TGIF2LXQ8IUE1 241 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 GALNT16Q8N428 558 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 BHLHE23Q8NDY6 225 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 GPR148Q8TDV2 347 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 MTFP1Q9UDX5 166 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 A8MVM7 634 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 PLPP3O14495 311 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 PHYHO14832 338 aa12.35□□□□□ -0.43
SF1-202ENST00000334944 AMY2AP04746 511 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms