RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Npsr1Q8BZP8 371 aa17.04■□□□□ 0.32
Trim71-201ENSMUST00000111816 Vwc2Q8C8N3 324 aa17.04■□□□□ 0.32
Trim71-201ENSMUST00000111816 Crb3Q8QZT4 113 aa17.04■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr1446Q8VFX4 308 aa17.04■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr888Q9EQA5 314 aa17.04■□□□□ 0.32
Trim71-201ENSMUST00000111816 Cdc42ep5Q9Z0X0 150 aa17.04■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr785A0A0N4SVC3 312 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr721-ps1A0A140T8T9 324 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Prdx6O08709 224 aaKnown RBP17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 FhitO89106 150 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Thbs3Q05895 956 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Dusp3Q9D7X3 185 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 PipoxQ9D826 390 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Zfp979A2A799 407 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 TyrP11344 533 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Cfap161Q6P8Y0 303 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Defb19Q8K3I8 83 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Oit3Q8R4V5 546 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Angptl4Q9Z1P8 410 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Ankrd60A2AMD2 318 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr248E9Q1L6 309 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Ms4a7E9Q9V5 267 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 CryabP23927 175 aaKnown RBP17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Dpagt1P42867 410 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Kcng3P59053 433 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 SnrpeP62305 92 aaKnown RBP17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Cnep1r1Q3UJ81 125 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Eif4e2Q8BMB3 245 aaKnown RBP17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Tmem125Q8CHQ6 216 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr780Q8VEU0 312 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 DcxrQ91X52 244 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Tmem128Q9CZB9 163 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 AgtrapQ9WVK0 161 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Scgb1b2O35176 93 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Slc30a3P97441 388 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 B4galnt1Q09200 533 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Pcolce2Q8R4W6 414 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr187Q8VEX6 308 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Prr23a1G3UW32 258 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Ctxn2Q3URE8 81 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 D11Wsu47eQ6PIX9 558 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr266Q8VFC3 316 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Nectin1Q9JKF6 515 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Wnt9bO35468 359 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 CryaaP24622 196 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Ranbp10Q6VN19 620 aaKnown RBP17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Ido2Q8R0V5 405 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Tmem106aQ8VC04 261 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Rpl17Q9CPR4 184 aaKnown RBP17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Pde6dO55057 150 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Msto1Q2YDW2 556 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Nufip2Q5F2E7 692 aaKnown RBP17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Fam57bQ7TNV1 275 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 2610318N02RikQ80VT5 305 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Enpp6Q8BGN3 440 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Sec22aQ8BH47 307 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Pop4Q9CR08 221 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 PolmQ9JIW4 496 aa17.03■□□□□ 0.32
Trim71-201ENSMUST00000111816 Gm5157A0A087WRH8 301 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Gm4565A0A140LJ87 301 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr623E9Q382 317 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Defa13P50711 93 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Ecm29Q6PDI5 1840 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Tnfrsf1bP25119 474 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Znf750Q8BH05 703 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr1391Q8VFA4 311 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Cd209aQ91ZX1 238 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Pdzd3Q99MJ6 498 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Robo3Q9Z2I4 1366 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Kiaa1522A2A7S8 1013 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Wnt7aP24383 349 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Tcl1aP56280 116 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Ctxn1Q8K129 82 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Slc25a42Q8R0Y8 318 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Xylt2Q9EPL0 865 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Gm21761J3QK00 171 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Tesk1O70146 627 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Rnf113a1Q8R3P8 341 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Cldn19Q9ET38 224 aa17.02■□□□□ 0.32
Trim71-201ENSMUST00000111816 Olfr635K7N6B1 321 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Gsx2P31316 305 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Htr7P32304 448 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Traf4Q61382 470 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Lpar5Q149R9 372 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 SrmsQ62270 496 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 IfnkQ7TSL0 199 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Kcnmb1Q8CAE3 191 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Ceacam2Q925P2 520 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Cmtm2bQ9DAC0 210 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Klk1b8P07628 261 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Ssr4Q62186 172 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 NotumQ8R116 503 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Olfr272Q8VGA0 319 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Clec2dQ91V08 207 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Mid1ip1Q9CQ20 182 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Psmg3Q9CZH3 122 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 4930578G10RikQ9D4Q4 153 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Nkx2-4Q9EQM3 354 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 Dok3Q9QZK7 444 aa17.02■□□□□ 0.31
Trim71-201ENSMUST00000111816 StrapQ9Z1Z2 350 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms