RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 AURKCQ9UQB9 309 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 HIF3AQ9Y2N7 669 aa11.18□□□□□ -0.62
PRPF39-204ENST00000553605 NOP16Q9Y3C1 178 aaKnown RBP11.18□□□□□ -0.62
PRPF39-204ENST00000553605 hCG_1807616A0A1W2PRN6 198 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 H7C1C5 153 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 M0QX08 132 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 RER1O15258 196 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 BIRC5O15392 142 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 NDUFB3O43676 98 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 CLIC3O95833 236 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 GRPP07492 148 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 CHRM2P08172 466 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 PPIBP23284 216 aaKnown RBP11.17□□□□□ -0.62
PRPF39-204ENST00000553605 RBM34P42696 430 aaKnown RBP11.17□□□□□ -0.62
PRPF39-204ENST00000553605 LCN6P62502 163 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 ELF3P78545 371 aaPredicted RBP11.17□□□□□ -0.62
PRPF39-204ENST00000553605 ECH1Q13011 328 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 WDR38Q5JTN6 314 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 SLC36A1Q7Z2H8 476 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 OR5AU1Q8NGC0 362 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 TMEM239Q8WW34 195 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 ACOT11Q8WXI4 607 aaPredicted RBP11.17□□□□□ -0.62
PRPF39-204ENST00000553605 SLCO4A1Q96BD0 722 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 GRPEL1Q9HAV7 217 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 CAPN7Q9Y6W3 813 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 DNAH7Q8WXX0 4024 aa11.17□□□□□ -0.62
PRPF39-204ENST00000553605 TRBV23-1A0A0A0MS06 115 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 A6NLC8 198 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 TRPC5OSA6NMA1 111 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 M0R1W7 72 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 POLR3GO15318 223 aaPredicted RBP11.16□□□□□ -0.62
PRPF39-204ENST00000553605 GMDSO60547 372 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 LYL1P12980 280 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 MUC1P15941 1255 aaPredicted RBP11.16□□□□□ -0.62
PRPF39-204ENST00000553605 GPX2P18283 190 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 LSM6P62312 80 aaKnown RBP11.16□□□□□ -0.62
PRPF39-204ENST00000553605 STX3Q13277 289 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 IKZF1Q13422 519 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 CNN3Q15417 329 aaKnown RBP11.16□□□□□ -0.62
PRPF39-204ENST00000553605 MICBQ29980 383 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
PRPF39-204ENST00000553605 LRIF1Q5T3J3 769 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 HCP5Q6MZN7 132 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 COLCA1Q6ZS62 124 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 PGAP1Q75T13 922 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 MEPCEQ7L2J0 689 aaKnown RBP11.16□□□□□ -0.62
PRPF39-204ENST00000553605 FAM216BQ8N7L0 139 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 H1FXQ92522 213 aaKnown RBP11.16□□□□□ -0.62
PRPF39-204ENST00000553605 ADAT1Q9BUB4 502 aaKnown RBP11.16□□□□□ -0.62
PRPF39-204ENST00000553605 MUC13Q9H3R2 512 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 IKZF5Q9H5V7 419 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 LGALS13Q9UHV8 139 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 GMEB1Q9Y692 573 aa11.16□□□□□ -0.62
PRPF39-204ENST00000553605 TCRBV4S1A1TA0A5B7 111 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 MALLQ13021 153 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 BLMHQ13867 455 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 LRRC10Q5BKY1 277 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 LRRC75AQ8NAA5 344 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 COQ7Q99807 217 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 ASCL2Q99929 193 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 PALMDQ9NP74 551 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 VAPAQ9P0L0 249 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 NKX1-2Q9UD57 310 aaPredicted RBP11.15□□□□□ -0.62
PRPF39-204ENST00000553605 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.62
PRPF39-204ENST00000553605 MED31Q9Y3C7 131 aa11.15□□□□□ -0.62
PRPF39-204ENST00000553605 TSSC4Q9Y5U2 329 aaPredicted RBP11.15□□□□□ -0.62
PRPF39-204ENST00000553605 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 EVPLLA8MZ36 301 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 ACOT8O14734 319 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 SYNGR1O43759 233 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 IFNW1P05000 195 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 CCDC159P0C7I6 412 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 PAICSP22234 425 aaKnown RBP11.14□□□□□ -0.63
PRPF39-204ENST00000553605 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
PRPF39-204ENST00000553605 TGM4P49221 684 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 PCK2Q16822 640 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 RSPO1Q2MKA7 263 aaPredicted RBP11.14□□□□□ -0.63
PRPF39-204ENST00000553605 Q6ZS46 218 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 LINC00482Q8N8I6 264 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 Q8NFD4 153 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 HDHD2Q9H0R4 259 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 CORO2BQ9UQ03 480 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 NDUFAF1Q9Y375 327 aa11.14□□□□□ -0.63
PRPF39-204ENST00000553605 LSM4Q9Y4Z0 139 aaKnown RBP11.14□□□□□ -0.63
PRPF39-204ENST00000553605 A0A1W2PQ09 198 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 CD300LBA8K4G0 201 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 F2RL2O00254 374 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 UBDO15205 165 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 CTLA4P16410 223 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 GSK3BP49841 420 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 TAS2R41P59536 307 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 DGCR2P98153 550 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 TMEM95Q3KNT9 176 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 RABL3Q5HYI8 236 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 TCTEX1D4Q5JR98 221 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 UNQ9370/PRO34162Q6UXP9 181 aa11.13□□□□□ -0.63
PRPF39-204ENST00000553605 MRPL21Q7Z2W9 205 aaKnown RBP11.13□□□□□ -0.63
PRPF39-204ENST00000553605 GLB1L2Q8IW92 636 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms