RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 VGLL3A8MV65 326 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 F2RL2O00254 374 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 NDUFB3O43676 98 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 MT-ND1P03886 318 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 ALDOBP05062 364 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 HOXB9P17482 250 aaPredicted RBP11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 AQP1P29972 269 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 IKZF1Q13422 519 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 GK2Q14410 553 aaPredicted RBP11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 OTPQ5XKR4 325 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 COLCA1Q6ZS62 124 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 MSANTD1Q6ZTZ1 278 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 SLC36A1Q7Z2H8 476 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 SMYD1Q8NB12 490 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 OR4D11Q8NGI4 311 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 PFN4Q8NHR9 129 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 H1FXQ92522 213 aaKnown RBP11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 PRR25Q96S07 402 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 C20orf27Q9GZN8 174 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 RMND5AQ9H871 391 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 PYCARDQ9ULZ3 195 aa11.14□□□□□ -0.63
NKX3-1-202ENST00000523261 FRAS1Q86XX4 4008 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 hCG_1807616A0A1W2PRN6 198 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 ACOT8O14734 319 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 SPAG7O75391 227 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 SERPINB7O75635 380 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 IGF2P01344 180 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 SELLP14151 372 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 MUC1P15941 1255 aaPredicted RBP11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 AMY2BP19961 511 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 PAICSP22234 425 aaKnown RBP11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 TGM4P49221 684 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 RAB13P51153 203 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 PCK2Q16822 640 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 DUSP7Q16829 419 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 MICBQ29980 383 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 ALG10Q5BKT4 473 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 RABL3Q5HYI8 236 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 KRT77Q7Z794 578 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 LIPHQ8WWY8 451 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 GTF2H4Q92759 462 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 SGTBQ96EQ0 304 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 CITED4Q96RK1 184 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 ADAT1Q9BUB4 502 aaKnown RBP11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 SLC22A4Q9H015 551 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 AURKCQ9UQB9 309 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 NDUFAF1Q9Y375 327 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 NOP16Q9Y3C1 178 aaKnown RBP11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
NKX3-1-202ENST00000523261 RYR1P21817 5038 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 A6NLC8 198 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 SDHDO14521 159 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 RER1O15258 196 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 POLR3GO15318 223 aaPredicted RBP11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 GSK3BP49841 420 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 RPL14P50914 215 aaKnown RBP11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 ECH1Q13011 328 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 BLMHQ13867 455 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 SCARB2Q14108 478 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 RSPO1Q2MKA7 263 aaPredicted RBP11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 LRRC10Q5BKY1 277 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 CENPVQ7Z7K6 275 aaPredicted RBP11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 DYNAPQ8N1N2 210 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 GPR32P1Q8NGA4 272 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 OR5D13Q8NGL4 314 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 SPRYD4Q8WW59 207 aaPredicted RBP11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 SORT1Q99523 831 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 PPCSQ9HAB8 311 aa11.12□□□□□ -0.63
NKX3-1-202ENST00000523261 H7C1C5 153 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 GMDSO60547 372 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 GRPP07492 148 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 THBS3P49746 956 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 ABCE1P61221 599 aaKnown RBP11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 LCN6P62502 163 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 IL5RAQ01344 420 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 PLA1AQ53H76 456 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 SBSPONQ8IVN8 264 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 MSRB3Q8IXL7 192 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 SLCO4A1Q96BD0 722 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 SEH1LQ96EE3 360 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 DUS3LQ96G46 650 aaKnown RBP11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 TMEM38AQ9H6F2 299 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 GRPEL1Q9HAV7 217 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 SLC25A37Q9NYZ2 338 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 HIF3AQ9Y2N7 669 aa11.11□□□□□ -0.63
NKX3-1-202ENST00000523261 A0A1W2PQ09 198 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 A6NIZ1 184 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 CTXN1P60606 82 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 RAP1BP61224 184 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 LSM6P62312 80 aaKnown RBP11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 RAP1AP62834 184 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 C10orf99Q6UWK7 81 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 NKAIN4Q8IVV8 208 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 TMEM255BQ8WV15 326 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 LRRC29Q8WV35 223 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 PKNOX2Q96KN3 472 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms