RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ARHGAP21Q5T5U3 1957 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 A0A0U1RQV5 110 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 A0A1B0GVI7 797 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 H3BMQ9 156 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 C16orf97H3BN30 126 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 SRSF10O75494 262 aaKnown RBP12.16□□□□□ -0.46
SMAD9-204ENST00000483941 MTRF1O75570 445 aaKnown RBP12.16□□□□□ -0.46
SMAD9-204ENST00000483941 UGT2B10P36537 528 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 ASCL1P50553 236 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 NANOS3P60323 173 aaKnown RBP12.16□□□□□ -0.46
SMAD9-204ENST00000483941 RPS25P62851 125 aaKnown RBP12.16□□□□□ -0.46
SMAD9-204ENST00000483941 CTF1Q16619 201 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 KRTAP27-1Q3LI81 207 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 Q499Y3 187 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 ACSM3Q53FZ2 586 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 STAC2Q6ZMT1 411 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 SLC16A12Q6ZSM3 486 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 CEACAM19Q7Z692 300 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 MDP1Q86V88 176 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 C1orf174Q8IYL3 243 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 OR5L1Q8NGL2 311 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 ITLN2Q8WWU7 325 aaPredicted RBP12.16□□□□□ -0.46
SMAD9-204ENST00000483941 SLITRK2Q9H156 845 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 G6PC2Q9NQR9 355 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF224Q9NZL3 707 aa12.16□□□□□ -0.46
SMAD9-204ENST00000483941 EIF3KQ9UBQ5 218 aaKnown RBP12.16□□□□□ -0.46
SMAD9-204ENST00000483941 GABRPO00591 440 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 GPX5O75715 221 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 PNPP00491 289 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 ACSM4P0C7M7 580 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 PATE4P0C8F1 98 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 OCM2P0CE71 109 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 TUBG1P23258 451 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 MYL9P24844 172 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 RANBP1P43487 201 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 FABP5Q01469 135 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 MALLQ13021 153 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 PRSS35Q8N3Z0 413 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 APOBEC3DQ96AK3 386 aaPredicted RBP12.15□□□□□ -0.46
SMAD9-204ENST00000483941 POM121Q96HA1 1249 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 PDCD1LG2Q9BQ51 273 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 OPA3Q9H6K4 179 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 NGBQ9NPG2 151 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 TUBG2Q9NRH3 451 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 TXNL4BQ9NX01 149 aaKnown RBP12.15□□□□□ -0.46
SMAD9-204ENST00000483941 CKLFQ9UBR5 152 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 DHDHQ9UQ10 334 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 NAV3Q8IVL0 2385 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 CACNA1CQ13936 2221 aa12.15□□□□□ -0.46
SMAD9-204ENST00000483941 C5orf49A4QMS7 147 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 XRCC2O43543 280 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 SYT7O43581 403 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 LCATP04180 440 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 AGAP20933 346 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 SOX6P35712 828 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 SERPINB10P48595 397 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 PSMD7P51665 324 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 MFGE8Q08431 387 aaPredicted RBP12.14□□□□□ -0.47
SMAD9-204ENST00000483941 TESK1Q15569 626 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 FBXL19-AS1Q494R0 122 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 UNQ9370/PRO34162Q6UXP9 181 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 SPNS3Q6ZMD2 512 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 FAM57BQ71RH2 274 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 DOK3Q7L591 496 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 TPRA1Q86W33 373 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 COMMD2Q86X83 199 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 CROCCP3Q8IVE0 287 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 CPEB3Q8NE35 698 aaKnown RBP12.14□□□□□ -0.47
SMAD9-204ENST00000483941 SLC30A7Q8NEW0 376 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 LILRB4Q8NHJ6 448 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 FGFBP3Q8TAT2 258 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 TSEN15Q8WW01 171 aaKnown RBP12.14□□□□□ -0.47
SMAD9-204ENST00000483941 AKAP1Q92667 903 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMAD9-204ENST00000483941 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
SMAD9-204ENST00000483941 C10orf35Q96D05 121 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 MED18Q9BUE0 208 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 CDH20Q9HBT6 801 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 SLC24A3Q9HC58 644 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 BRD7Q9NPI1 651 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 SLC22A13Q9Y226 551 aa12.14□□□□□ -0.47
SMAD9-204ENST00000483941 ZNF469Q96JG9 3925 aaPredicted RBP12.14□□□□□ -0.47
SMAD9-204ENST00000483941 FREM1Q5H8C1 2179 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 TRAV1-2A0A0B4J238 106 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 TRBV5-5A0A0J9YX44 114 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 TRIM64BA6NI03 449 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 DHRS7CA6NNS2 312 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 PDCD5O14737 125 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 TBX1O43435 398 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 TMEM127O75204 238 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 SC5DO75845 299 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 IL1AP01583 271 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 IGKV3-15P01624 115 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 TTRP02766 147 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 APEX1P27695 318 aaKnown RBP12.13□□□□□ -0.47
SMAD9-204ENST00000483941 PEX19P40855 299 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 KIR3DL2P43630 455 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 MTNR1BP49286 362 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms