RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 C14orf79Q96F83 325 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 SLC41A3Q96GZ6 507 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 Q96MT0 163 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 CCDC43Q96MW1 224 aaKnown RBP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 OR52B2Q96RD2 323 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 SECISBP2Q96T21 854 aaKnown RBP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 OMDQ99983 421 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 ZNF251Q9BRH9 671 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 MS4A8Q9BY19 250 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 MRPL13Q9BYD1 178 aaKnown RBP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 KRTAP2-4Q9BYR9 128 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 KRTAP2-1Q9BYU5 128 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 MAF1Q9H063 256 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 XKR8Q9H6D3 395 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 NIPAL2Q9H841 368 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 GRPEL1Q9HAV7 217 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 CYP3A43Q9HB55 503 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 ZCCHC17Q9NP64 241 aaKnown RBP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 KCNJ16Q9NPI9 418 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 MED4Q9NPJ6 270 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 SUN2Q9UH99 717 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 NAGKQ9UJ70 344 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 FBXL3Q9UKT7 428 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 CES1P1Q9UKY3 287 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 RAB22AQ9UL26 194 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 B9D1Q9UPM9 204 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 AURKCQ9UQB9 309 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 NUDCQ9Y266 331 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 ST3GAL6Q9Y274 331 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 FARSAQ9Y285 508 aaKnown RBP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 MRPS16Q9Y3D3 137 aaKnown RBP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 ICOSQ9Y6W8 199 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 C2orf16Q68DN1 1984 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 COL1A1P02452 1464 aaPredicted RBP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 DISP1Q96F81 1524 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 KDM5BQ9UGL1 1544 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 MDC1Q14676 2089 aaKnown RBP-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 SHANK3Q9BYB0 1731 aa-0.18□□□□□ -2.44
RPL39P34-201ENST00000477141 CEP170Q5SW79 1584 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ZFC3H1O60293 1989 aaKnown RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 COL7A1Q02388 2944 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 SMIM26A0A096LP01 95 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 A0A0B4J2C4 111 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 A0A0G2JQZ4 141 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 A0A0U1RQV5 110 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ZNF816-ZNF321PA0A0X1KG74 233 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 GMNCA6NCL1 334 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 TRIM64A6NGJ6 449 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 TRIM64BA6NI03 449 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ZNF729A6NN14 1252 aaPredicted RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 PDZK1P1A8MUH7 402 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ODF3BA8MYP8 253 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 F8W036 122 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 GOLGA8SH3BPF8 625 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 FFAR1O14842 300 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 TRAPPC3O43617 180 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 PRKAB2O43741 272 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 FCMRO60667 390 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 DPM1O60762 260 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 SCN2BO60939 215 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 CDH16O75309 829 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 RDH16O75452 317 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 SERPINB7O75635 380 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 GOSR1O95249 250 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 MBD3O95983 291 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 MT-ATP6P00846 226 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 EIF4EP06730 217 aaKnown RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 CRYGBP07316 175 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 HMOX1P09601 288 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ZNF705DP0CH99 300 aaPredicted RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ZNF705BP0CI00 300 aaPredicted RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 MLNP12872 115 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ZNF22P17026 224 aaPredicted RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 PSMB9P28065 219 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 CRABP2P29373 138 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 IL12BP29460 328 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 SLC1A2P43004 574 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 SSR1P43307 286 aaKnown RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 GABRA4P48169 554 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 SSR4P51571 173 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 RPS23P62266 143 aaKnown RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 KCNJ2P63252 427 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 NUCB2P80303 420 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 IFITM3Q01628 133 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 EMX1Q04741 257 aaPredicted RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ATP5G2Q06055 141 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 PJVKQ0ZLH3 352 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 TRDNQ13061 729 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 RPA4Q13156 261 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 NAB1Q13506 487 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 CIRBPQ14011 172 aaKnown RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ENDOGQ14249 297 aaKnown RBP-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 GAMTQ14353 236 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 GK3PQ14409 553 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 HES1Q14469 280 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 NCF4Q15080 339 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 MAPRE2Q15555 327 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 TNXAQ16473 311 aa-0.19□□□□□ -2.44
RPL39P34-201ENST00000477141 ZNF791Q3KP31 576 aaPredicted RBP-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms