RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
RPL39P34-201ENST00000477141 CHIC1Q5VXU3 224 aa12.59□□□□□ -0.39
RPL39P34-201ENST00000477141 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
RPL39P34-201ENST00000477141 PHF23Q9BUL5 403 aaPredicted RBP11.32□□□□□ -0.6
RPL39P34-201ENST00000477141 POTEDQ86YR6 584 aa10.9□□□□□ -0.66
RPL39P34-201ENST00000477141 FOXD1Q16676 465 aa10.82□□□□□ -0.68
RPL39P34-201ENST00000477141 MSH5O43196 834 aa10.35□□□□□ -0.75
RPL39P34-201ENST00000477141 PIAS4Q8N2W9 510 aaPredicted RBP10□□□□□ -0.81
RPL39P34-201ENST00000477141 PPP6R1Q9UPN7 881 aa9.71□□□□□ -0.86
RPL39P34-201ENST00000477141 ADRA2BP18089 450 aa9.65□□□□□ -0.86
RPL39P34-201ENST00000477141 PLPPR3Q6T4P5 718 aa9.63□□□□□ -0.87
RPL39P34-201ENST00000477141 CACNB1Q02641 598 aaPredicted RBP9.15□□□□□ -0.94
RPL39P34-201ENST00000477141 DMRT2Q9Y5R5 561 aa9.09□□□□□ -0.95
RPL39P34-201ENST00000477141 MAPK8IP2Q13387 824 aaPredicted RBP9□□□□□ -0.97
RPL39P34-201ENST00000477141 SCAF1Q9H7N4 1312 aaKnown RBP8.88□□□□□ -0.99
RPL39P34-201ENST00000477141 RNF39Q9H2S5 420 aa8.77□□□□□ -1.01
RPL39P34-201ENST00000477141 DCAF8L1A6NGE4 600 aa8.72□□□□□ -1.01
RPL39P34-201ENST00000477141 C1QBPQ07021 282 aaKnown RBP8.62□□□□□ -1.03
RPL39P34-201ENST00000477141 HOXD11P31277 338 aaPredicted RBP8.58□□□□□ -1.04
RPL39P34-201ENST00000477141 POTEHQ6S545 545 aa8.45□□□□□ -1.06
RPL39P34-201ENST00000477141 DNAJC5BQ9UF47 199 aa8.41□□□□□ -1.06
RPL39P34-201ENST00000477141 RNF216Q9NWF9 866 aaPredicted RBP8.38□□□□□ -1.07
RPL39P34-201ENST00000477141 PPP4R3CPQ6ZMV5 832 aa8.35□□□□□ -1.07
RPL39P34-201ENST00000477141 CNKSR2Q8WXI2 1034 aa8.33□□□□□ -1.08
RPL39P34-201ENST00000477141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.15□□□□□ -1.1
RPL39P34-201ENST00000477141 DSG3P32926 999 aa8.04□□□□□ -1.12
RPL39P34-201ENST00000477141 CAPN15O75808 1086 aa7.96□□□□□ -1.14
RPL39P34-201ENST00000477141 SPINK5Q9NQ38 1064 aaPredicted RBP7.94□□□□□ -1.14
RPL39P34-201ENST00000477141 U3KPZ7 1027 aaPredicted RBP7.93□□□□□ -1.14
RPL39P34-201ENST00000477141 NCBP3Q53F19 620 aaKnown RBP7.9□□□□□ -1.14
RPL39P34-201ENST00000477141 NPM3O75607 178 aaKnown RBP7.77□□□□□ -1.17
RPL39P34-201ENST00000477141 ABCB7O75027 752 aa7.72□□□□□ -1.17
RPL39P34-201ENST00000477141 RBM42Q9BTD8 480 aaKnown RBP7.72□□□□□ -1.17
RPL39P34-201ENST00000477141 ZNF219Q9P2Y4 722 aaPredicted RBP7.72□□□□□ -1.17
RPL39P34-201ENST00000477141 TRHP20396 242 aaPredicted RBP7.71□□□□□ -1.18
RPL39P34-201ENST00000477141 CHRDL2Q6WN34 429 aa7.71□□□□□ -1.18
RPL39P34-201ENST00000477141 APLP2Q06481 763 aa7.7□□□□□ -1.18
RPL39P34-201ENST00000477141 SP7Q8TDD2 431 aaPredicted RBP7.7□□□□□ -1.18
RPL39P34-201ENST00000477141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.57□□□□□ -1.2
RPL39P34-201ENST00000477141 HNRNPUL2Q1KMD3 747 aaKnown RBP7.57□□□□□ -1.2
RPL39P34-201ENST00000477141 SLC4A2P04920 1241 aa7.54□□□□□ -1.2
RPL39P34-201ENST00000477141 SAMD1Q6SPF0 538 aaPredicted RBP7.49□□□□□ -1.21
RPL39P34-201ENST00000477141 PIP4P2Q8N4L2 257 aa7.42□□□□□ -1.22
RPL39P34-201ENST00000477141 AKT1S1Q96B36 256 aa7.42□□□□□ -1.22
RPL39P34-201ENST00000477141 HAX1O00165 279 aa7.4□□□□□ -1.22
RPL39P34-201ENST00000477141 POLA2Q14181 598 aa7.38□□□□□ -1.23
RPL39P34-201ENST00000477141 REM2Q8IYK8 340 aaPredicted RBP7.33□□□□□ -1.24
RPL39P34-201ENST00000477141 FXR2P51116 673 aaKnown RBP eCLIP7.31□□□□□ -1.24
RPL39P34-201ENST00000477141 PITPNM1O00562 1244 aa7.27□□□□□ -1.25
RPL39P34-201ENST00000477141 ZBTB12Q9Y330 459 aaPredicted RBP7.26□□□□□ -1.25
RPL39P34-201ENST00000477141 EVX2Q03828 476 aa7.25□□□□□ -1.25
RPL39P34-201ENST00000477141 MYCNP04198 464 aaPredicted RBP7.23□□□□□ -1.25
RPL39P34-201ENST00000477141 LHX8Q68G74 356 aa7.2□□□□□ -1.26
RPL39P34-201ENST00000477141 OSCARQ8IYS5 282 aa7.19□□□□□ -1.26
RPL39P34-201ENST00000477141 KCNA4P22459 653 aa7.18□□□□□ -1.26
RPL39P34-201ENST00000477141 PLSCR2Q9NRY7 297 aa7.14□□□□□ -1.27
RPL39P34-201ENST00000477141 C19orf67A6NJJ6 358 aa7.09□□□□□ -1.27
RPL39P34-201ENST00000477141 GABBR2O75899 941 aa7.09□□□□□ -1.27
RPL39P34-201ENST00000477141 PRKAR2AP13861 404 aaKnown RBP7.07□□□□□ -1.28
RPL39P34-201ENST00000477141 ATF5Q9Y2D1 282 aaPredicted RBP7.05□□□□□ -1.28
RPL39P34-201ENST00000477141 SPDYE2BA6NHP3 402 aa6.98□□□□□ -1.29
RPL39P34-201ENST00000477141 SPDYE6P0CI01 402 aa6.98□□□□□ -1.29
RPL39P34-201ENST00000477141 SPDYE2Q495Y8 402 aa6.98□□□□□ -1.29
RPL39P34-201ENST00000477141 SPDYE1Q8NFV5 336 aaPredicted RBP6.97□□□□□ -1.29
RPL39P34-201ENST00000477141 CLEC11AQ9Y240 323 aa6.95□□□□□ -1.3
RPL39P34-201ENST00000477141 POTEIP0CG38 1075 aa6.93□□□□□ -1.3
RPL39P34-201ENST00000477141 FOXD4L1Q9NU39 408 aa6.89□□□□□ -1.31
RPL39P34-201ENST00000477141 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
RPL39P34-201ENST00000477141 CLCN6P51797 869 aa6.86□□□□□ -1.31
RPL39P34-201ENST00000477141 FBLN2P98095 1184 aa6.85□□□□□ -1.31
RPL39P34-201ENST00000477141 SSUH2Q9Y2M2 353 aa6.83□□□□□ -1.32
RPL39P34-201ENST00000477141 CD44P16070 742 aaKnown RBP6.82□□□□□ -1.32
RPL39P34-201ENST00000477141 POTEMA6NI47 508 aa6.81□□□□□ -1.32
RPL39P34-201ENST00000477141 DCBLD2Q96PD2 775 aa6.8□□□□□ -1.32
RPL39P34-201ENST00000477141 ZNF692Q9BU19 519 aaPredicted RBP6.79□□□□□ -1.32
RPL39P34-201ENST00000477141 PRR29P0C7W0 189 aa6.78□□□□□ -1.32
RPL39P34-201ENST00000477141 POTEGQ6S5H5 508 aa6.77□□□□□ -1.33
RPL39P34-201ENST00000477141 OTUD5Q96G74 571 aa6.77□□□□□ -1.33
RPL39P34-201ENST00000477141 PCDH10Q9P2E7 1040 aa6.75□□□□□ -1.33
RPL39P34-201ENST00000477141 ATXN8OSP0DMR3 200 aa6.73□□□□□ -1.33
RPL39P34-201ENST00000477141 FARP1Q9Y4F1 1045 aaPredicted RBP6.73□□□□□ -1.33
RPL39P34-201ENST00000477141 MKRN4PQ13434 485 aaPredicted RBP6.71□□□□□ -1.34
RPL39P34-201ENST00000477141 ZNF579Q8NAF0 562 aaKnown RBP6.71□□□□□ -1.34
RPL39P34-201ENST00000477141 SLC4A1APQ9BWU0 796 aaKnown RBP6.69□□□□□ -1.34
RPL39P34-201ENST00000477141 POTEB2H3BUK9 544 aa6.68□□□□□ -1.34
RPL39P34-201ENST00000477141 PABPN1Q86U42 306 aaKnown RBP eCLIP6.67□□□□□ -1.34
RPL39P34-201ENST00000477141 GALR2O43603 387 aaPredicted RBP6.64□□□□□ -1.35
RPL39P34-201ENST00000477141 ZRANB1Q9UGI0 708 aa6.64□□□□□ -1.35
RPL39P34-201ENST00000477141 ZBTB22O15209 634 aa6.59□□□□□ -1.35
RPL39P34-201ENST00000477141 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
RPL39P34-201ENST00000477141 MAMSTRQ6ZN01 415 aa6.54□□□□□ -1.36
RPL39P34-201ENST00000477141 PELP1Q8IZL8 1130 aaKnown RBP6.53□□□□□ -1.36
RPL39P34-201ENST00000477141 METRNQ9UJH8 293 aa6.52□□□□□ -1.37
RPL39P34-201ENST00000477141 PAK3O75914 559 aaPredicted RBP6.51□□□□□ -1.37
RPL39P34-201ENST00000477141 POTEJP0CG39 1038 aa6.51□□□□□ -1.37
RPL39P34-201ENST00000477141 PHF12Q96QT6 1004 aa6.5□□□□□ -1.37
RPL39P34-201ENST00000477141 C7P10643 843 aa6.49□□□□□ -1.37
RPL39P34-201ENST00000477141 ASTLQ6HA08 431 aaPredicted RBP6.49□□□□□ -1.37
RPL39P34-201ENST00000477141 SLC39A7Q92504 469 aa6.49□□□□□ -1.37
RPL39P34-201ENST00000477141 FAM163AQ96GL9 167 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms