RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 FAM169BQ8N8A8 192 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 CPEB3Q8NE35 698 aaKnown RBP8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 AP3S1Q92572 193 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 CPNE2Q96FN4 548 aaPredicted RBP8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 ZC3HAV1LQ96H79 300 aaKnown RBP8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 RADILQ96JH8 1075 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 DCUN1D5Q9BTE7 237 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 CENPOQ9BU64 300 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 RBM38Q9H0Z9 239 aaKnown RBP8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 OR51B6Q9H340 312 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 G6PC2Q9NQR9 355 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 GPR84Q9NQS5 396 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 B3GNT2Q9NY97 397 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 JKAMPQ9P055 326 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 ATMQ13315 3056 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 DSPP15924 2871 aaKnown RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 NKX2-6A6NCS4 301 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 GGT3PA6NGU5 568 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 VSTM5A8MXK1 200 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 SRSF10O75494 262 aaKnown RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 GPX5O75715 221 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 DHRS3O75911 302 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 CDRT1O95170 752 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 IL1AP01583 271 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 IGKV3-15P01624 115 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 PRB1P04280 392 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 ERCC1P07992 297 aaPredicted RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 SELEP16581 610 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF14P17017 642 aaPredicted RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 UQCRFS1P47985 274 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 MTNR1BP49286 362 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 PSMD7P51665 324 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 RPS23P62266 143 aaKnown RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 MXD1Q05195 221 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 TAB1Q15750 504 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 CTF1Q16619 201 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 C3orf36Q3SXR2 165 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 CD200R1LQ6Q8B3 271 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 PGAP1Q75T13 922 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 TPRA1Q86W33 373 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 CROCCP3Q8IVE0 287 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 SERPINA12Q8IW75 414 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF808Q8N4W9 903 aaPredicted RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 WDR31Q8NA23 367 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 SEMA6DQ8NFY4 1073 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 OR5D14Q8NGL3 314 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 OR13C5Q8NGS8 318 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 LILRB4Q8NHJ6 448 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 RPS4Y2Q8TD47 263 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 ITFG2Q969R8 447 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 POM121L2Q96KW2 1035 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 C1QTNF5Q9BXJ0 243 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 BCL2L14Q9BZR8 327 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 NOX3Q9HBY0 568 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 NOX4Q9NPH5 578 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 SNTG1Q9NSN8 517 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 PTTG3PQ9NZH4 202 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 PTTG2Q9NZH5 202 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 POU2F3Q9UKI9 436 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 SF3B6Q9Y3B4 125 aaKnown RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 SLC25A15Q9Y619 301 aa8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 RP1L1Q8IWN7 2480 aaPredicted RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 NCOA6Q14686 2063 aaPredicted RBP8.92□□□□□ -0.98
PRPF38A-202ENST00000474048 LOC100509620A0A075B734 347 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 A0A1W2PPK0 400 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF503-AS2A6NEH8 195 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 CLDN14O95500 239 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 CECR9P0C854 216 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 RAB3BP20337 219 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 AGAP20933 346 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 TUBG1P23258 451 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 PTAFRP25105 342 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 GCH1P30793 250 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 RORCP51449 518 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 SELENOVP59797 346 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 ADORA2A-AS1P86434 159 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 SORDQ00796 357 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 RIPPLY1Q0D2K3 151 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 DOC2BQ14184 412 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 CNPY1Q3B7I2 92 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 SNAI3Q3KNW1 292 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 FBXL19-AS1Q494R0 122 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 SOWAHCQ53LP3 525 aaPredicted RBP8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 GLYATL3Q5SZD4 288 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 RDH10Q8IZV5 341 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF843Q8N446 348 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 OR1J1Q8NGS3 322 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 NDNFQ8TB73 568 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 PP6455Q8WZ26 134 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 C10orf35Q96D05 121 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 DERL3Q96Q80 235 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 TPK1Q9H3S4 243 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 ESRP2Q9H6T0 727 aaKnown RBP8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 TUBG2Q9NRH3 451 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 TBCCD1Q9NVR7 557 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 PIGLQ9Y2B2 252 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 BOD1L1Q8NFC6 3051 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 LAMA5O15230 3695 aa8.91□□□□□ -0.98
PRPF38A-202ENST00000474048 COL6A6A6NMZ7 2263 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms