RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 NCS1P62166 190 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 PPP3R1P63098 170 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 DOC2BQ14184 412 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 DGUOKQ16854 277 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 C3orf36Q3SXR2 165 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 SLC16A12Q6ZSM3 486 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 MRPL21Q7Z2W9 205 aaKnown RBP8.48□□□□□ -1.05
CCM2-204ENST00000470837 C1orf174Q8IYL3 243 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 ZNF843Q8N446 348 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 FTMTQ8N4E7 242 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 TMEM106AQ96A25 262 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 MS4A3Q96HJ5 214 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 REEP6Q96HR9 211 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 DCUN1D5Q9BTE7 237 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 C1QTNF5Q9BXJ0 243 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 DCSTAMPQ9H295 470 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 NOX3Q9HBY0 568 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 NEK6Q9HC98 313 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 GPR84Q9NQS5 396 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 USP24Q9UPU5 2620 aa8.48□□□□□ -1.05
CCM2-204ENST00000470837 GTF3C1Q12789 2109 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 LOC100509620A0A075B734 347 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 TRBV5-5A0A0J9YX44 114 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 MAGEB3O15480 346 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 CDRT1O95170 752 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 PRB1P04280 392 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 TUBG1P23258 451 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 PEX19P40855 299 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 RANBP1P43487 201 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 MAP2K3P46734 347 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 PSMD7P51665 324 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 ADORA2A-AS1P86434 159 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 TAB1Q15750 504 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 CNPY1Q3B7I2 92 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 KRTAP27-1Q3LI81 207 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 FBXL19-AS1Q494R0 122 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 FOXB2Q5VYV0 432 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 TMEM108Q6UXF1 575 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 PGAP1Q75T13 922 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 NAA40Q86UY6 237 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 TPRA1Q86W33 373 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 WFDC8Q8IUA0 241 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 ZNF584Q8IVC4 421 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 SERPINA12Q8IW75 414 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 ZNF808Q8N4W9 903 aaPredicted RBP8.47□□□□□ -1.05
CCM2-204ENST00000470837 SEMA6DQ8NFY4 1073 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 OR5D14Q8NGL3 314 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 OR13C5Q8NGS8 318 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 NDNFQ8TB73 568 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 ITFG2Q969R8 447 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 PPP1R14AQ96A00 147 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 RNF166Q96A37 237 aaPredicted RBP8.47□□□□□ -1.05
CCM2-204ENST00000470837 ZC3HAV1LQ96H79 300 aaKnown RBP8.47□□□□□ -1.05
CCM2-204ENST00000470837 NOX4Q9NPH5 578 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 TUBG2Q9NRH3 451 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 SNTG1Q9NSN8 517 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 TBCCD1Q9NVR7 557 aa8.47□□□□□ -1.05
CCM2-204ENST00000470837 A0A1W2PPK0 400 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 LOC390937A0A1W2PQ73 354 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 NKX2-6A6NCS4 301 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 GGT3PA6NGU5 568 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 ANXA2P2A6NMY6 339 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 DHRS3O75911 302 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 CLDN14O95500 239 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 IL1AP01583 271 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 ERCC1P07992 297 aaPredicted RBP8.46□□□□□ -1.06
CCM2-204ENST00000470837 CELA3BP08861 270 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 UCHL1P09936 223 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 CECR9P0C854 216 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 SELEP16581 610 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 SRMP19623 302 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 PTAFRP25105 342 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 PCSK6P29122 969 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 SDC2P34741 201 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 MTNR1BP49286 362 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 RORCP51449 518 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 RPS23P62266 143 aaKnown RBP8.46□□□□□ -1.06
CCM2-204ENST00000470837 RPS11P62280 158 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCM2-204ENST00000470837 SORDQ00796 357 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 MXD1Q05195 221 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 RIPPLY1Q0D2K3 151 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 INSL4Q14641 139 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 SPCS2Q15005 226 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 RSPO1Q2MKA7 263 aaPredicted RBP8.46□□□□□ -1.06
CCM2-204ENST00000470837 SNAI3Q3KNW1 292 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 SOWAHCQ53LP3 525 aaPredicted RBP8.46□□□□□ -1.06
CCM2-204ENST00000470837 GLYATL3Q5SZD4 288 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 TMEM91Q6ZNR0 172 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 PRSS45Q7RTY3 260 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 MED12LQ86YW9 2145 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 CROCCP3Q8IVE0 287 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 AP3S1Q92572 193 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 FGGYQ96C11 551 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 C10orf35Q96D05 121 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 RADILQ96JH8 1075 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 DOCK7Q96N67 2140 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 BBC3Q96PG8 261 aaPredicted RBP8.46□□□□□ -1.06
CCM2-204ENST00000470837 DERL3Q96Q80 235 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 BCL2L14Q9BZR8 327 aa8.46□□□□□ -1.06
CCM2-204ENST00000470837 OR51B6Q9H340 312 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms