RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 SLC22A4Q9H015 551 aa9.71□□□□□ -0.86
LSM2-209ENST00000470083 C1orf123Q9NWV4 160 aa9.71□□□□□ -0.86
LSM2-209ENST00000470083 NKX1-2Q9UD57 310 aaPredicted RBP9.71□□□□□ -0.86
LSM2-209ENST00000470083 PRPF19Q9UMS4 504 aaKnown RBP9.71□□□□□ -0.86
LSM2-209ENST00000470083 AURKCQ9UQB9 309 aa9.71□□□□□ -0.86
LSM2-209ENST00000470083 HIF3AQ9Y2N7 669 aa9.71□□□□□ -0.86
LSM2-209ENST00000470083 SF3B6Q9Y3B4 125 aaKnown RBP9.71□□□□□ -0.86
LSM2-209ENST00000470083 GMEB1Q9Y692 573 aa9.71□□□□□ -0.86
LSM2-209ENST00000470083 IGHV3OR15-7A0A075B7D8 119 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 RER1O15258 196 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 BIRC5O15392 142 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 CLIC3O95833 236 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 LHBP01229 141 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 CD247P20963 164 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 PAICSP22234 425 aaKnown RBP9.7□□□□□ -0.86
LSM2-209ENST00000470083 CA6P23280 308 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 MICBQ29980 383 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 LRIF1Q5T3J3 769 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 HCP5Q6MZN7 132 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 SLC36A1Q7Z2H8 476 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 FAM216BQ8N7L0 139 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 TMEM255BQ8WV15 326 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 SPRYD4Q8WW59 207 aaPredicted RBP9.7□□□□□ -0.86
LSM2-209ENST00000470083 ACOT11Q8WXI4 607 aaPredicted RBP9.7□□□□□ -0.86
LSM2-209ENST00000470083 CCL13Q99616 98 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 ADAT1Q9BUB4 502 aaKnown RBP9.7□□□□□ -0.86
LSM2-209ENST00000470083 CDCA4Q9BXL8 241 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 GRPEL1Q9HAV7 217 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 LGALS13Q9UHV8 139 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 PCLOQ9Y6V0 5065 aa9.7□□□□□ -0.86
LSM2-209ENST00000470083 hCG_1807616A0A1W2PRN6 198 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 A6NLC8 198 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 H7C1C5 153 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 GMDSO60547 372 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 CHRM2P08172 466 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 LYL1P12980 280 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 MUC1P15941 1255 aaPredicted RBP9.69□□□□□ -0.86
LSM2-209ENST00000470083 GPX2P18283 190 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 PAX6P26367 422 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 CTXN1P60606 82 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 LSM6P62312 80 aaKnown RBP9.69□□□□□ -0.86
LSM2-209ENST00000470083 LCN6P62502 163 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 ELF3P78545 371 aaPredicted RBP9.69□□□□□ -0.86
LSM2-209ENST00000470083 CNN3Q15417 329 aaKnown RBP9.69□□□□□ -0.86
LSM2-209ENST00000470083 WDR38Q5JTN6 314 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 ZNF826PQ6ZT77 177 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 NKAIN4Q8IVV8 208 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 LINC00482Q8N8I6 264 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 Q8NFD4 153 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 OR5AU1Q8NGC0 362 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 TMEM239Q8WW34 195 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 COQ7Q99807 217 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 PRSS22Q9GZN4 317 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 HDHD2Q9H0R4 259 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 IKZF5Q9H5V7 419 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 SLAMF8Q9P0V8 285 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 ZMAT5Q9UDW3 170 aaKnown RBP9.69□□□□□ -0.86
LSM2-209ENST00000470083 CORO2BQ9UQ03 480 aa9.69□□□□□ -0.86
LSM2-209ENST00000470083 TSSC4Q9Y5U2 329 aaPredicted RBP9.69□□□□□ -0.86
LSM2-209ENST00000470083 TEX13CA0A0J9YWL9 993 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 TRPC5OSA6NMA1 111 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 VGLL3A8MV65 326 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 M0QX08 132 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 NDUFB3O43676 98 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 IFNW1P05000 195 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 ALDOBP05062 364 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 VDAC2P45880 294 aaPredicted RBP9.68□□□□□ -0.86
LSM2-209ENST00000470083 ECH1Q13011 328 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 IKZF1Q13422 519 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 PCK2Q16822 640 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 LRRC10Q5BKY1 277 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 OTPQ5XKR4 325 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 PGAP1Q75T13 922 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 LRRC75AQ8NAA5 344 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 MUC13Q9H3R2 512 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 PALMDQ9NP74 551 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 VAPAQ9P0L0 249 aa9.68□□□□□ -0.86
LSM2-209ENST00000470083 TRBV5-3A0A0A0MS03 114 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 TRBV23-1A0A0A0MS06 115 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 TCRBV4S1A1TA0A5B7 111 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 CD300LBA8K4G0 201 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 H0YHG0 523 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 SYNGR1O43759 233 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 AHCYL1O43865 530 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 GRPP07492 148 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 CTLA4P16410 223 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 TGM4P49221 684 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 MALLQ13021 153 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 STX3Q13277 289 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 BLMHQ13867 455 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 RSPO1Q2MKA7 263 aaPredicted RBP9.67□□□□□ -0.86
LSM2-209ENST00000470083 TMEM95Q3KNT9 176 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 KRTAP27-1Q3LI81 207 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 RABL3Q5HYI8 236 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 TCTEX1D4Q5JR98 221 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 CCDC121Q6ZUS5 278 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 EIF1ADQ8N9N8 165 aaKnown RBP9.67□□□□□ -0.86
LSM2-209ENST00000470083 C11orf65Q8NCR3 313 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 OR5D13Q8NGL4 314 aa9.67□□□□□ -0.86
LSM2-209ENST00000470083 H1FXQ92522 213 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms