RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 GGACTQ9BVM4 153 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 ASH2LQ9UBL3 628 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 A0A0B4J2A0 478 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 PPIHO43447 177 aaKnown RBP12.4□□□□□ -0.42
GPC1-208ENST00000469694 ALOX12BO75342 701 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 HTR5AP47898 357 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.4□□□□□ -0.42
GPC1-208ENST00000469694 POMZP3Q6PJE2 187 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 ZNF417Q8TAU3 575 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 FOXRED1Q96CU9 486 aaPredicted RBP12.4□□□□□ -0.42
GPC1-208ENST00000469694 SHPKQ9UHJ6 478 aa12.4□□□□□ -0.42
GPC1-208ENST00000469694 TNRC6BQ9UPQ9 1833 aaKnown RBP12.4□□□□□ -0.42
GPC1-208ENST00000469694 UPK3AO75631 287 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 CD5P06127 495 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 ZNF124Q15973 351 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 C2orf76Q3KRA6 126 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 AKIRIN2Q53H80 203 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 SLC35D3Q5M8T2 416 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 LYG2Q86SG7 212 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 NPEPL1Q8NDH3 523 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 GTF3AQ92664 365 aaKnown RBP12.4□□□□□ -0.43
GPC1-208ENST00000469694 PMM1Q92871 262 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 C8orf44Q96CB5 159 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 NMNAT3Q96T66 252 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 TRIM2Q9C040 744 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 KCNK15Q9H427 330 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 MKKSQ9NPJ1 570 aaPredicted RBP12.4□□□□□ -0.43
GPC1-208ENST00000469694 UBQLN4Q9NRR5 601 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 RARRES3Q9UL19 164 aa12.4□□□□□ -0.43
GPC1-208ENST00000469694 TRBV5-7A0A0A0MS05 114 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 TACSTD2P09758 323 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 OR8G3PP0DMU2 310 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 LIPCP11150 499 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 PNLIPP16233 465 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 PSMB6P28072 239 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 GALNSP34059 522 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 AKR1C3P42330 323 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 DEFA6Q01524 100 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 TEX30Q5JUR7 227 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 MARCH3Q86UD3 253 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 BPIFB2Q8N4F0 458 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 MITD1Q8WV92 249 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 DAZLQ92904 295 aaKnown RBP12.39□□□□□ -0.43
GPC1-208ENST00000469694 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
GPC1-208ENST00000469694 SMIM8Q96KF7 97 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 CACFD1Q9UGQ2 172 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 TIMM10BQ9Y5J6 103 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 TRBV6-7A0A0A0MS04 114 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 AP4M1O00189 453 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 SCDO00767 359 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 CDC40O60508 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
GPC1-208ENST00000469694 ZNF354AO60765 605 aaPredicted RBP12.39□□□□□ -0.43
GPC1-208ENST00000469694 IL33O95760 270 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 RNF224P0DH78 156 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 CFPP27918 469 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 P2RY4P51582 365 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 ACY1Q03154 408 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 SGCAQ16586 387 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 SCGB2B2Q4G0G5 96 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 OTPQ5XKR4 325 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 HLA-DQA1Q5Y7H0 255 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 ULK3Q6PHR2 472 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 SLC25A42Q86VD7 318 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 OR1N1Q8NGS0 311 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 TAAR9Q96RI9 348 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 MICU1Q9BPX6 476 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 ZNF426Q9BUY5 554 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 WWTR1Q9GZV5 400 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 ATG5Q9H1Y0 275 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 UFSP2Q9NUQ7 469 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 CSAG2Q9Y5P2 127 aa12.39□□□□□ -0.43
GPC1-208ENST00000469694 C9JQL5 133 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 MFNGO00587 321 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 NDUFB2O95178 105 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 IL2RAP01589 272 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 CRHP06850 196 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 ITGA5P08648 1049 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 ACKR3P25106 362 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 RPL4P36578 427 aaKnown RBP12.38□□□□□ -0.43
GPC1-208ENST00000469694 RAB2AP61019 212 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 PPP1R1AQ13522 171 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 TOMM34Q15785 309 aaPredicted RBP12.38□□□□□ -0.43
GPC1-208ENST00000469694 FAM76BQ5HYJ3 339 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 RHOUQ7L0Q8 258 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 ZNF550Q7Z398 422 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 DCUN1D4Q92564 292 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 TMEM106AQ96A25 262 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 C3orf49Q96BT1 292 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 SLC6A7Q99884 636 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 OCSTAMPQ9BR26 566 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 TUBA4BQ9H853 241 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 RPS10P5Q9NQ39 176 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 SLC17A5Q9NRA2 495 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 COPS7AQ9UBW8 275 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 SRPK3Q9UPE1 567 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 A0A1B0GTH9 108 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 C9orf170A2RU37 121 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms