RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SEH1LQ96EE3 360 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 PLEKHF2Q9H8W4 249 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 XIRP1Q702N8 1843 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 GABRR3A8MPY1 467 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 FCN1O00602 326 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 PAPLNO95428 1278 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 JUNBP17275 347 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 PTGER1P34995 402 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 CDC34P49427 236 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 GNG10P50151 68 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM102Q8N9M5 508 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 FAM234AQ9H0X4 552 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 RAB27BO00194 218 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 ALOX12BO75342 701 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 GLB1P16278 677 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 SUB1P53999 127 aaKnown RBP eCLIP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 Q6ZNB5 142 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 GDPD3Q7L5L3 318 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR51A2Q8NGJ7 313 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR13G1Q8NGZ3 307 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 ADAMTS17Q8TE56 1095 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 UCN3Q969E3 161 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 DMRTA2Q96SC8 542 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR4C45A6NMZ5 311 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 HAND1O96004 215 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 GABRB1P18505 474 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 BSGP35613 385 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 OPRD1P41143 372 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 SRP9P49458 86 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 ZNF91Q05481 1191 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR51S1Q8NGJ8 323 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 DYNLRB1Q9NP97 96 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 CSF3P09919 207 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 ACHEP22303 614 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 S100A4P26447 101 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 CLDN20P56880 219 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 DPPA3Q6W0C5 159 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 SNRPGP15A8MWD9 76 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 DDAH2O95865 285 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 HMGN2P05204 90 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 COMPP49747 757 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 KLRB1Q12918 225 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 MOB3CQ70IA8 216 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 TSEN54Q7Z6J9 526 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 C20orf27Q9GZN8 174 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 WDR61Q9GZS3 305 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 EMC9Q9Y3B6 208 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 MMACHCQ9Y4U1 282 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 LAMA4Q16363 1823 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 CD82P27701 267 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 NPY4RP50391 375 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 KCNAB1Q14722 419 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 SSX1Q16384 188 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 DEFB109BQ30KR1 87 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 PHYHIPQ92561 330 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 SHARPINQ9H0F6 387 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 TBC1D29Q9UFV1 150 aa12.8□□□□□ -0.36
RAPGEF1-202ENST00000372190 POU2F2P09086 479 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 GABRG2P18507 467 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 CR2P20023 1033 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 ZNF385BQ569K4 471 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 GLYATL3Q5SZD4 288 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR5AU1Q8NGC0 362 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 TINAGL1Q9GZM7 467 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 CDCP1Q9H5V8 836 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 PSORS1C1Q9UIG5 152 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM269A0A1B0GVZ9 245 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 PPM1DO15297 605 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 GALR3O60755 368 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 CSNK1A1P48729 337 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 HSD17B7P56937 341 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 ARF6P62330 175 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 TRAF4Q9BUZ4 470 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 B3GALT5Q9Y2C3 310 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 PJVKQ0ZLH3 352 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR2B11Q5JQS5 317 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR2G6Q5TZ20 316 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 DEFB124Q8NES8 71 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 AMDHD1Q96NU7 426 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 NPAS1Q99742 590 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 PPP6CO00743 305 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 SLC25A4P12235 298 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 CRISP2P16562 243 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 FUT1P19526 365 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 CYB561P49447 251 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 ZNF85Q03923 595 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 GABRA6Q16445 453 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 SMN1Q16637 294 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 PODNL1Q6PEZ8 512 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 CMTM4Q8IZR5 234 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 UBALD1Q8TB05 177 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 ATF6BQ99941 703 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM184BQ9Y519 407 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 LOC100289279A0A1B0GTE1 492 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 A0A1W2PN81 502 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 IFITM10A6NMD0 228 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 GLSO94925 669 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 IGLV3-27P01718 113 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms