RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MTFP1Q9UDX5 166 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 KLF13Q9Y2Y9 288 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-201ENST00000315286 FREM1Q5H8C1 2179 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 ALDOBP05062 364 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 ITGB2P05107 769 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 H2AFB2P0C5Z0 115 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF708P17019 499 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 SRSF6Q13247 344 aaKnown RBP16.12■□□□□ 0.17
CCDC43-201ENST00000315286 FAAP20Q6NZ36 180 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 OR14K1Q8NGZ2 314 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 FAM86C1Q9NVL1 165 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 MCUBQ9NWR8 336 aa16.12■□□□□ 0.17
CCDC43-201ENST00000315286 NAP1L6A6NFF2 107 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 KLRC4-KLRK1H3BQV0 150 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 IGLV3-1P01715 115 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 B4GALT1P15291 398 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 CEACAM16Q2WEN9 425 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 OLFML2AQ68BL7 652 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF627Q7L945 461 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 OR5AS1Q8N127 324 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 AKAP1Q92667 903 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCDC43-201ENST00000315286 UQCC2Q9BRT2 126 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 GHITMQ9H3K2 345 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF292O60281 2723 aa16.11■□□□□ 0.17
CCDC43-201ENST00000315286 C7orf66A4D0T2 115 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 M0R135 149 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 NKX2-8O15522 239 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 CST2P09228 141 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PRSS3P35030 304 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF93P35789 620 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PPIAP62937 165 aaKnown RBP16.1■□□□□ 0.17
CCDC43-201ENST00000315286 RSPO4Q2I0M5 234 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-201ENST00000315286 MOGAT2Q3SYC2 334 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 RIPPLY2Q5TAB7 128 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PGAP1Q75T13 922 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PAQR4Q8N4S7 273 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-201ENST00000315286 ITFG2Q969R8 447 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PTX4Q96A99 478 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF799Q96GE5 643 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 SPACA5Q96QH8 159 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 FOXB1Q99853 325 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 TP63Q9H3D4 680 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-201ENST00000315286 GPR35Q9HC97 309 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 NKIRAS2Q9NYR9 191 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 MYO7BQ6PIF6 2116 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 IGKV3D-15A0A087WSY6 115 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 MEIS3P1A6NDR6 274 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 SGCEO43556 437 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PATE4P0C8F1 98 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 CD46P15529 392 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PSMB1P20618 241 aaKnown RBP16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PCGF3Q3KNV8 242 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PRSS33Q8NF86 280 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 OR56B4Q8NH76 319 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 SPTSSAQ969W0 71 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 TMEM45BQ96B21 275 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 C20orf85Q9H1P6 137 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 FLVCR2Q9UPI3 526 aa16.1■□□□□ 0.17
CCDC43-201ENST00000315286 RIF1Q5UIP0 2472 aaKnown RBP16.1■□□□□ 0.17
CCDC43-201ENST00000315286 PTPRBP23467 1997 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 A0A0U1RQV5 110 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 IGHV3-9P01782 118 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ERCC1P07992 297 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 RAB6AP20340 208 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 RAG2P55895 527 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 QRFPP83859 136 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 PMPCAQ10713 525 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 UNC119Q13432 240 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 GSG1Q2KHT4 349 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 HYAL4Q2M3T9 481 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF774Q6NX45 483 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 MEIOBQ8N635 442 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF486Q96H40 463 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 RNF170Q96K19 258 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 PAQR5Q9NXK6 330 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 RAB22AQ9UL26 194 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 NOSIPQ9Y314 301 aaKnown RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 URB1O60287 2271 aaKnown RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 SYNGR3O43761 229 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF32P17041 273 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 CRYGSP22914 178 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 CAPZA1P52907 286 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 SOX8P57073 446 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ARG2P78540 354 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 RAB35Q15286 201 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 TSPO2Q5TGU0 170 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ANGPTL5Q86XS5 388 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ZFP62Q8NB50 900 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ACTR6Q9GZN1 396 aa16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ZNF552Q9H707 407 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ZMAT3Q9HA38 289 aaKnown RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 MOV10Q9HCE1 1003 aaKnown RBP16.09■□□□□ 0.17
CCDC43-201ENST00000315286 ASPMQ8IZT6 3477 aa16.08■□□□□ 0.17
CCDC43-201ENST00000315286 MRPL33O75394 65 aaKnown RBP16.08■□□□□ 0.16
CCDC43-201ENST00000315286 BPNT1O95861 308 aa16.08■□□□□ 0.16
CCDC43-201ENST00000315286 APOC1P02654 83 aa16.08■□□□□ 0.16
CCDC43-201ENST00000315286 FCER2P06734 321 aa16.08■□□□□ 0.16
CCDC43-201ENST00000315286 VSIG8P0DPA2 414 aa16.08■□□□□ 0.16
CCDC43-201ENST00000315286 RRADP55042 308 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms