RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ZNF704Q6ZNC4 412 aaPredicted RBP11.98□□□□□ -0.49
SKA3-202ENST00000314759 ZSCAN4Q8NAM6 433 aaPredicted RBP11.98□□□□□ -0.49
SKA3-202ENST00000314759 SLC26A10Q8NG04 563 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 RHOFQ9HBH0 211 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 C9JQL5 133 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 EIF1BO60739 113 aaKnown RBP11.97□□□□□ -0.49
SKA3-202ENST00000314759 IFNA6P05013 189 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 CTSEP14091 401 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 ZNF44P15621 663 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 PGCP20142 388 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 IL12BP29460 328 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 EIF1P41567 113 aaKnown RBP11.97□□□□□ -0.49
SKA3-202ENST00000314759 TMEM244Q5VVB8 128 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 NAA40Q86UY6 237 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 WDFY1Q8IWB7 410 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 ZNF721Q8TF20 911 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 CLCC1Q96S66 551 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 SOX1O00570 391 aaPredicted RBP11.97□□□□□ -0.49
SKA3-202ENST00000314759 AGPAT2O15120 278 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 DDAH2O95865 285 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 IGHMP01871 453 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 ZNF823P16415 610 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 IL11P20809 199 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 CTHP32929 405 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 NAAAQ02083 359 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 FZD2Q14332 565 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 TGIF1Q15583 401 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 PTCRAQ6ISU1 281 aaPredicted RBP11.97□□□□□ -0.49
SKA3-202ENST00000314759 ZNF600Q6ZNG1 722 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 OR2I1PQ8NGU4 316 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 EDARADDQ8WWZ3 215 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 C14orf79Q96F83 325 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 ZNF285Q96NJ3 590 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 ZNF251Q9BRH9 671 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 NAA11Q9BSU3 229 aaPredicted RBP11.97□□□□□ -0.49
SKA3-202ENST00000314759 NMES1Q9C002 83 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 CENPMQ9NSP4 180 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 CPAMD8Q8IZJ3 1885 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 IGKV1D-43A0A0B4J1Z2 117 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 SPTY2D1-AS1A0A0U1RR47 76 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 A8MVM7 634 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 ALG1L2C9J202 215 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 NDUFS6O75380 124 aaKnown RBP11.97□□□□□ -0.49
SKA3-202ENST00000314759 ABCD3P28288 659 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 GNALP38405 381 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 POLR2HP52434 150 aaKnown RBP11.97□□□□□ -0.49
SKA3-202ENST00000314759 F2RL1P55085 397 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 RAB5BP61020 215 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 PNLIPRP3Q17RR3 467 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 HOGA1Q86XE5 327 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 SKA3Q8IX90 412 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 ADAT3Q96EY9 351 aaPredicted RBP11.97□□□□□ -0.49
SKA3-202ENST00000314759 TBL1XR1Q9BZK7 514 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 OR2S2Q9NQN1 319 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 SLC5A6Q9Y289 635 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 PCDHGA1Q9Y5H4 931 aa11.97□□□□□ -0.49
SKA3-202ENST00000314759 ARID1AO14497 2285 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 ATG2AQ2TAZ0 1938 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 MYO9BQ13459 2157 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 LINC01565O15544 149 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 ZNF217O75362 1048 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 SFTA3P0C7M3 94 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 SMIM6P0DI80 62 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 HSD11B1P28845 292 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 SLC26A5P58743 744 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 SMCO1Q147U7 214 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 DTWD2Q8NBA8 298 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 PRR13Q9NZ81 148 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 MIOXQ9UGB7 285 aa11.96□□□□□ -0.49
SKA3-202ENST00000314759 TSPAN2O60636 221 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 SEMA4FO95754 770 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 BPNT1O95861 308 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 IGHV4-34P06331 123 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 S100A9P06702 114 aaKnown RBP11.96□□□□□ -0.5
SKA3-202ENST00000314759 OR1D4P47884 311 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 CX3CR1P49238 355 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 EBPQ15125 230 aaKnown RBP11.96□□□□□ -0.5
SKA3-202ENST00000314759 SGCAQ16586 387 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 PCK2Q16822 640 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 EIF2S3LQ2VIR3 472 aaKnown RBP11.96□□□□□ -0.5
SKA3-202ENST00000314759 RNF144BQ7Z419 303 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 C9orf40Q8IXQ3 194 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 OR4K15Q8NH41 348 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.96□□□□□ -0.5
SKA3-202ENST00000314759 TCEAL3Q969E4 200 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 NICN1Q9BSH3 213 aa11.96□□□□□ -0.5
SKA3-202ENST00000314759 H0YIG0 161 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 RNASEK-C17orf49H0YIS7 233 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 TTRP02766 147 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 PTAFRP25105 342 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 ID4P47928 161 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 MMP16P51512 607 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.95□□□□□ -0.5
SKA3-202ENST00000314759 SLC22A24Q8N4F4 322 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 FOXQ1Q9C009 403 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 DZANK1Q9NVP4 752 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 GHRLQ9UBU3 117 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 LPAR3Q9UBY5 353 aa11.95□□□□□ -0.5
SKA3-202ENST00000314759 TMEM131Q92545 1883 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms