RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 AIREO43918 545 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 IGLV1-44P01699 117 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 COX5BP10606 129 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 EPXP11678 715 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 PSMA1P25786 263 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 CALCRP30988 508 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 GABRA5P31644 462 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 TTKP33981 857 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 ERVS71-1P61550 626 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 TFF3Q07654 80 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 MRPL28Q13084 256 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 HLXQ14774 488 aaPredicted RBP8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 CTF1Q16619 201 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 ACSM3Q53FZ2 586 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 GLYATL3Q5SZD4 288 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 C22orf42Q6IC83 251 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 CEACAM19Q7Z692 300 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 C12orf43Q96C57 262 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 ISOC1Q96CN7 298 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 FAM71F1Q96KD3 344 aaPredicted RBP8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 OR14A2Q96R54 314 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 MED18Q9BUE0 208 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 COMMD4Q9H0A8 199 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 GPR84Q9NQS5 396 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 BATF3Q9NR55 127 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 TXNL4BQ9NX01 149 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 CRNNQ9UBG3 495 aaPredicted RBP8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 STUB1Q9UNE7 303 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 ROS1P08922 2347 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 ICE1Q9Y2F5 2266 aa8.42□□□□□ -1.06
SNRNP40-201ENST00000263694 SPTAN1Q13813 2472 aaKnown RBP8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 RGS9O75916 674 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 ATE1O95260 518 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 CLDN14O95500 239 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF92Q03936 586 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 SPOCK1Q08629 439 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 SPCS2Q15005 226 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 TBC1D28Q2M2D7 210 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 FBXL19-AS1Q494R0 122 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 SPATA46Q5T0L3 261 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF544Q6NX49 715 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 RFPL4BQ6ZWI9 263 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 COMMD2Q86X83 199 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 NDNFQ8TB73 568 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 C1QTNF5Q9BXJ0 243 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 CDH20Q9HBT6 801 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 OBP2BQ9NPH6 170 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 NPDC1Q9NQX5 325 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 PTTG3PQ9NZH4 202 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 ATPIF1Q9UII2 106 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 SSR3Q9UNL2 185 aa8.41□□□□□ -1.06
SNRNP40-201ENST00000263694 PLCE1Q9P212 2302 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 IGHV2OR16-5A0A0B4J2B6 119 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 SMIM31A0A1B0GVY4 71 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 TRDV1A0A1B0GX56 115 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 SHISA3A0PJX4 238 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 SMIM30A4D0T7 59 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF879B4DU55 563 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 H3BMQ9 156 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 C19orf84I3L1E1 186 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 PIN1P1O15428 100 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 GPRIN2O60269 458 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 SC5DO75845 299 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 GABARAPO95166 117 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 APOC1P02654 83 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 HLA-DPB1P04440 258 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 CD1AP06126 327 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF35P13682 527 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 TMBIM6P55061 237 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 SRSF1Q07955 248 aaKnown RBP eCLIP8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 ZMAT1Q5H9K5 638 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 DMRTC1Q5HYR2 192 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 XKRXQ6PP77 449 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 CD200R1LQ6Q8B3 271 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 UNQ9370/PRO34162Q6UXP9 181 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF704Q6ZNC4 412 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 COLCA1Q6ZS62 124 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF808Q8N4W9 903 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 MS4A15Q8N5U1 240 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 HAVCR2Q8TDQ0 301 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 TSEN15Q8WW01 171 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 DGCR14Q96DF8 476 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 REEP6Q96HR9 211 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 KCNS3Q9BQ31 491 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 OR10A2Q9H208 303 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 NOX4Q9NPH5 578 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 RSL24D1Q9UHA3 163 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 ADGRG4Q8IZF6 3080 aa8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 ANKHD1Q8IWZ3 2542 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-201ENST00000263694 TRBV5-5A0A0J9YX44 114 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 DPRXA6NFQ7 191 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 SYT7O43581 403 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 SMPD2O60906 423 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 IGLV3-1P01715 115 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 ISG15P05161 165 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 CLEC2LP0C7M8 214 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 OCM2P0CE71 109 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 UBCP0CG48 685 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 CD53P19397 219 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms