RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 PRR18Q8N4B5 295 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 PPP1R1CQ8WVI7 109 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 ZCCHC4Q9H5U6 513 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 MBTPS2O43462 519 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 IL5P05113 134 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 THBS2P35442 1172 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 RGS19P49795 217 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 AGFG1P52594 562 aaKnown RBP11.53□□□□□ -0.56
MSH6-215ENST00000622629 KLF9Q13886 244 aaPredicted RBP11.53□□□□□ -0.56
MSH6-215ENST00000622629 IAH1Q2TAA2 248 aaPredicted RBP11.53□□□□□ -0.56
MSH6-215ENST00000622629 FHL5Q5TD97 284 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 YRDCQ86U90 279 aaKnown RBP11.53□□□□□ -0.56
MSH6-215ENST00000622629 OR10G3Q8NGC4 313 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 ST8SIA4Q92187 359 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 NICN1Q9BSH3 213 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 METTL9Q9H1A3 318 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 KCNS2Q9ULS6 477 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 THSD7BQ9C0I4 1608 aa11.53□□□□□ -0.56
MSH6-215ENST00000622629 HSPB6O14558 160 aa11.52□□□□□ -0.56
MSH6-215ENST00000622629 KLF4O43474 513 aa11.52□□□□□ -0.56
MSH6-215ENST00000622629 SERPINF1P36955 418 aa11.52□□□□□ -0.56
MSH6-215ENST00000622629 ZNF121P58317 390 aaPredicted RBP11.52□□□□□ -0.56
MSH6-215ENST00000622629 CEBPEQ15744 281 aa11.52□□□□□ -0.56
MSH6-215ENST00000622629 SFRP5Q5T4F7 317 aa11.52□□□□□ -0.56
MSH6-215ENST00000622629 FAM199XQ6PEV8 388 aaPredicted RBP11.52□□□□□ -0.56
MSH6-215ENST00000622629 CLEC1BQ9P126 229 aa11.52□□□□□ -0.56
MSH6-215ENST00000622629 PCDHGA9Q9Y5G4 932 aaKnown RBP11.52□□□□□ -0.56
MSH6-215ENST00000622629 TCF20Q9UGU0 1960 aaKnown RBP11.52□□□□□ -0.57
MSH6-215ENST00000622629 EFNB2P52799 333 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 AANATQ16613 207 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 SLC25A43Q8WUT9 341 aaPredicted RBP11.52□□□□□ -0.57
MSH6-215ENST00000622629 KISS1RQ969F8 398 aaPredicted RBP11.52□□□□□ -0.57
MSH6-215ENST00000622629 GHITMQ9H3K2 345 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 NTMQ9P121 344 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 EP300Q09472 2414 aaPredicted RBP11.52□□□□□ -0.57
MSH6-215ENST00000622629 MTCL1Q9Y4B5 1905 aaKnown RBP11.52□□□□□ -0.57
MSH6-215ENST00000622629 TMEM200CA6NKL6 621 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 C17orf51A8MQB3 221 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 DDAH2O95865 285 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 NME2P22392 152 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 CNN3Q15417 329 aaKnown RBP11.52□□□□□ -0.57
MSH6-215ENST00000622629 LGALSLQ3ZCW2 172 aaPredicted RBP11.52□□□□□ -0.57
MSH6-215ENST00000622629 RABEPKQ7Z6M1 372 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 CDC20BQ86Y33 519 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 SHISA5Q8N114 240 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 CTHRC1Q96CG8 243 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 ZNF845Q96IR2 970 aaPredicted RBP11.52□□□□□ -0.57
MSH6-215ENST00000622629 C1QTNF6Q9BXI9 259 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 PRDM6Q9NQX0 595 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 GPR173Q9NS66 373 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 PCDHGA5Q9Y5G8 931 aa11.52□□□□□ -0.57
MSH6-215ENST00000622629 PLPP3O14495 311 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 RER1O15258 196 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 MED6O75586 246 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 SULT1A3P0DMM9 295 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 SULT1A4P0DMN0 295 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 ACTBL2Q562R1 376 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 TMED6Q8WW62 240 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 TMEM184BQ9Y519 407 aaPredicted RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 CSAG2Q9Y5P2 127 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 WIF1Q9Y5W5 379 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 DNAJC13O75165 2243 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 C7orf66A4D0T2 115 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 K7EPK0 472 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 EIF1BO60739 113 aaKnown RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 OPRM1P35372 400 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 MGAT2Q10469 447 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 ZNF169Q14929 603 aaPredicted RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 SMUG1Q53HV7 270 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 CLLU1Q5K131 121 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 ELFN2Q5R3F8 820 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 TMEM71Q6P5X7 295 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 DOK3Q7L591 496 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 PAPOLGQ9BWT3 736 aaKnown RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 EXOSC3Q9NQT5 275 aaKnown RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 GLS2Q9UI32 602 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 A6NLC8 198 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 HLA-DOBP13765 273 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 MSR1P21757 451 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 CARD18P57730 90 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 PCK2Q16822 640 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 TRIM61Q5EBN2 209 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 GUSBP11Q6P575 273 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 GVQW1Q8N7I0 195 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 MRGPRX4Q96LA9 322 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 AMELYQ99218 206 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 ANKUB1A6NFN9 424 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 TOR1AO14656 332 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 BET1O15155 118 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 PIN1P1O15428 100 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 CNOT4O95628 575 aaKnown RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 ZNF250P15622 560 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 RPS4Y1P22090 263 aaKnown RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 ATP1B3P54709 279 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 GRB2P62993 217 aaKnown RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 PHLDA2Q53GA4 152 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 KRBOX4Q5JUW0 171 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 ADGRG3Q86Y34 549 aa11.51□□□□□ -0.57
MSH6-215ENST00000622629 OR52N4Q8NGI2 321 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms