RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	SERPINA3	P01011	423 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	IL1A	P01583	271 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	CLEC2L	P0C7M8	214 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MSR1	P21757	451 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SDC2	P34741	201 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	RNPS1	Q15287	305 aa	Known RBP	11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	GUSBP1	Q15486	140 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	KRTAP21-3	Q3LHN1	58 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZNF404	Q494X3	552 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ACSM3	Q53FZ2	586 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SHE	Q5VZ18	495 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	FOXL2NB	Q6ZUU3	175 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	BIVM	Q86UB2	503 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	CXorf67	Q86X51	503 aa	Predicted RBP	11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	TUSC5	Q8IXB3	177 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	OR6K3	Q8NGY3	331 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	OR2G2	Q8NGZ5	317 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SLAMF6	Q96DU3	332 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	PERP	Q96FX8	193 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MAP6	Q96JE9	813 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	HS3ST6	Q96QI5	342 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	NELFA	Q9H3P2	528 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	TPK1	Q9H3S4	243 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	C12orf49	Q9H741	205 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SIAE	Q9HAT2	523 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	GDF2	Q9UK05	429 aa	Predicted RBP	11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZNF281	Q9Y2X9	895 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	LHFPL6	Q9Y693	200 aa		11.82	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MRPL33	O75394	65 aa	Known RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZNF254	O75437	659 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZFPL1	O95159	310 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	INHBB	P09529	407 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	H2BFM	P0C1H6	154 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	RORC	P51449	518 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	LSM6	P62312	80 aa	Known RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	CFAP77	Q6ZQR2	320 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	OR5AK2	Q8NH90	309 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	RNF133	Q8WVZ7	376 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	PIGT	Q969N2	578 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZNF837	Q96EG3	531 aa	Predicted RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZNF416	Q9BWM5	594 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	COMMD4	Q9H0A8	199 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	BCO1	Q9HAY6	547 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	CRLF2	Q9HC73	371 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ASH2L	Q9UBL3	628 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	GTF2A1L	Q9UNN4	478 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SMIM30	A4D0T7	59 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZNF724	A8MTY0	619 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SS18L1	O75177	396 aa	Predicted RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SC5D	O75845	299 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	KRT33A	O76009	404 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	PNP	P00491	289 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	CALR	P27797	417 aa	Known RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	OPRL1	P41146	370 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	KIR3DL2	P43630	455 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	RPS11	P62280	158 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MFGE8	Q08431	387 aa	Predicted RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	HNRNPA0	Q13151	305 aa	Known RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	YIF1B	Q5BJH7	314 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	WDR38	Q5JTN6	314 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	FAM27D1	Q5T7N8	215 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ALKBH2	Q6NS38	261 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZNF544	Q6NX49	715 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	FDX2	Q6P4F2	183 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	DEGS2	Q6QHC5	323 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	CLEC9A	Q6UXN8	241 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	PRSS35	Q8N3Z0	413 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZNF676	Q8N7Q3	588 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZFAND2B	Q8WV99	257 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SLC25A46	Q96AG3	418 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	NABP1	Q96AH0	204 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	C4orf45	Q96LM5	186 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488		Q96MF0	132 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	BARHL1	Q9BZE3	327 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SLCO5A1	Q9H2Y9	848 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MMP27	Q9H306	513 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	PARPBP	Q9NWS1	579 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	FBXL3	Q9UKT7	428 aa		11.81	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SHISA3	A0PJX4	238 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	TMEM212	A6NML5	194 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	OR4C45	A6NMZ5	311 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	SMAD7	O15105	426 aa	Known RBP	11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	GATB	O75879	557 aa	Known RBP	11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	YES1	P07947	543 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MYL9	P24844	172 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MTNR1B	P49286	362 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MRPS34	P82930	218 aa	Known RBP	11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ENDOG	Q14249	297 aa	Known RBP	11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	MOG	Q16653	247 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ODF4	Q2M2E3	257 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	CEACAM16	Q2WEN9	425 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	FREM1	Q5H8C1	2179 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	ZMAT1	Q5H9K5	638 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	TSPO2	Q5TGU0	170 aa		11.8	□□□□□ -0.52
PPHLN1-223	ENST00000610488	KLHL24	Q6TFL4	600 aa		11.8	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms