RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CEACAM19Q7Z692 300 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 ELMOD2Q8IZ81 293 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 GABRG1Q8N1C3 465 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 RPRMLQ8N4K4 120 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZNF433Q8N7K0 673 aaPredicted RBP16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZNF283Q8N7M2 679 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 NAXEQ8NCW5 288 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 DYNC2LI1Q8TCX1 351 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 GPR148Q8TDV2 347 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 DCUN1D5Q9BTE7 237 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 WNT5BQ9H1J7 359 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZNF224Q9NZL3 707 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZNF629Q9UEG4 869 aaPredicted RBP16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 GTF2A1LQ9UNN4 478 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 TRGV8A0A0C4DH27 118 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 TRBV5-5A0A0J9YX44 114 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 CIB4A0PJX0 185 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 E9PLN8 166 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 IL1AP01583 271 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF182P17025 639 aaPredicted RBP16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 ACHEP22303 614 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 CRYGSP22914 178 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 PRKXP51817 358 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 TPTEP56180 551 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 PMPCAQ10713 525 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 Q499Y3 187 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZMAT1Q5H9K5 638 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF774Q6NX45 483 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 DRAM2Q6UX65 266 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF610Q8N9Z0 462 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 FGFBP3Q8TAT2 258 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 VKORC1Q9BQB6 163 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 PBOV1Q9GZY1 135 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 RNF167Q9H6Y7 350 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 SLC17A5Q9NRA2 495 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 TINAGQ9UJW2 476 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 SLC22A13Q9Y226 551 aa16.64■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF879B4DU55 563 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 M0R135 149 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 MSTNO14793 375 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 RAF1P04049 648 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF121P58317 390 aaPredicted RBP16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 GALK2Q01415 458 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 PLP2Q04941 152 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 GABRA6Q16445 453 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 PABPC1L2AQ5JQF8 200 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 C1QTNF12Q5T7M4 302 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 C3P1Q6ZMU1 363 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 C17orf78Q8N4C9 275 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 AKR7LQ8NHP1 331 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 RGP1Q92546 391 aaPredicted RBP16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 ZNF799Q96GE5 643 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 DCLRE1CQ96SD1 692 aaKnown RBP16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 OBP2BQ9NPH6 170 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 B3GNT2Q9NY97 397 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 CCDC59Q9P031 241 aaKnown RBP16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 HHLA2Q9UM44 414 aa16.63■□□□□ 0.25
CSPG4P13-201ENST00000565545 TRAV1-2A0A0B4J238 106 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 F5H5K5 113 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 HLA-HP01893 362 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 UCHL1P09936 223 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 PATE4P0C8F1 98 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 OCM2P0CE71 109 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 CD79AP11912 226 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 PAX7P23759 505 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 MYL9P24844 172 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 GRNP28799 593 aaKnown RBP16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 TGFBR1P36897 503 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 HTR5AP47898 357 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 MTNR1BP49286 362 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 RIPPLY3P57055 190 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 UBE2NP61088 152 aaKnown RBP16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 RAB1AP62820 205 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 RSPO1Q2MKA7 263 aaPredicted RBP16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 PRSS45Q7RTY3 260 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 MRGPRGQ86SM5 289 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 TPRA1Q86W33 373 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 CCDC54Q8NEL0 328 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 DACH2Q96NX9 599 aa16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 OPN3Q9H1Y3 402 aaPredicted RBP16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 KLF2Q9Y5W3 355 aaPredicted RBP16.62■□□□□ 0.25
CSPG4P13-201ENST00000565545 IQCMA0A1B0GVH7 501 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 CCL21O00585 134 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 CDRT1O95170 752 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 TTRP02766 147 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 ANXA2P07355 339 aaKnown RBP16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 HOXC12P31275 282 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 SOX6P35712 828 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 CA7P43166 264 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 INSL4Q14641 139 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 GSG1Q2KHT4 349 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 HIKESHIQ53FT3 197 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 SFRP5Q5T4F7 317 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 OR52H1Q8NGJ2 320 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 OR13C5Q8NGS8 318 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 ITLN2Q8WWU7 325 aaPredicted RBP16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 PGAM5Q96HS1 289 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 DERL3Q96Q80 235 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 OR14A2Q96R54 314 aa16.61■□□□□ 0.25
CSPG4P13-201ENST00000565545 DMRTA2Q96SC8 542 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms