RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 LINC00518Q8N0U6 118 aa10.56□□□□□ -0.72
CLP1-205ENST00000533682 OR9K2Q8NGE7 335 aa10.56□□□□□ -0.72
CLP1-205ENST00000533682 HAVCR1Q96D42 359 aa10.56□□□□□ -0.72
CLP1-205ENST00000533682 OR2M2Q96R28 347 aa10.56□□□□□ -0.72
CLP1-205ENST00000533682 PBOV1Q9GZY1 135 aa10.56□□□□□ -0.72
CLP1-205ENST00000533682 PPA2Q9H2U2 334 aa10.56□□□□□ -0.72
CLP1-205ENST00000533682 ING3Q9NXR8 418 aa10.56□□□□□ -0.72
CLP1-205ENST00000533682 RCE1Q9Y256 329 aa10.56□□□□□ -0.72
CLP1-205ENST00000533682 LOC102725191A0A1B0GVB3 256 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 NPIPA2E9PIF3 369 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 NPIPA3F8WFD2 350 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 IGFBP3P17936 291 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 FKBP2P26885 142 aaKnown RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 GABREP78334 506 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 FOXO1Q12778 655 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 KLF9Q13886 244 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 SFRP4Q6FHJ7 346 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 DEGS2Q6QHC5 323 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 ZNF782Q6ZMW2 699 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 SUMF1Q8NBK3 374 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 OR2AJ1Q8NGZ0 328 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 OR51E1Q8TCB6 317 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 FAM3DQ96BQ1 224 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 ADAT3Q96EY9 351 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 RBM24Q9BX46 236 aaKnown RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 BEX1Q9HBH7 125 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 PARD6AQ9NPB6 346 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 PNRC2Q9NPJ4 139 aaKnown RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 CEP250Q9BV73 2442 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 KMT2EQ8IZD2 1858 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 PTPRZ1P23471 2315 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 ATMQ13315 3056 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 ARPC4-TTLL3A0A0A6YYG9 625 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 MEIS3P1A6NDR6 274 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 CXCL13O43927 109 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 NEURL1O76050 574 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 ISG15P05161 165 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 CD2P06729 351 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 HOXD4P09016 255 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 ARSBP15848 533 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 ITGA3P26006 1051 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 GDF1P27539 372 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 SRD5A2P31213 254 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 CSNK1A1P48729 337 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 TAS2R20P59543 309 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 BAMBIQ13145 260 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 SNTB2Q13425 540 aaKnown RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 TRIP6Q15654 476 aaKnown RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 GFOD2Q3B7J2 385 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 DCAF10Q5QP82 559 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 DTX1Q86Y01 620 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 SLC25A28Q96A46 364 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 ZNF845Q96IR2 970 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 ELF5Q9UKW6 265 aaPredicted RBP10.55□□□□□ -0.72
CLP1-205ENST00000533682 MUC6Q6W4X9 2439 aa10.55□□□□□ -0.72
CLP1-205ENST00000533682 HSD11B1P28845 292 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 GNALP38405 381 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 CARD18P57730 90 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 GUCA2AQ02747 115 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 FAM166AQ6J272 317 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 KLHL24Q6TFL4 600 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 LUZP2Q86TE4 346 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 TMEM123Q8N131 208 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 OR8H3Q8N146 312 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 JAGN1Q8N5M9 183 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 MARC2Q969Z3 335 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 SFXN2Q96NB2 322 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 SPACA5Q96QH8 159 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 CACNG6Q9BXT2 260 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 SLC5A6Q9Y289 635 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 A0A0A6YYJ9 748 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 TMEM272A0A1B0GTI8 110 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 CIB4A0PJX0 185 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 OR5H15A6NDH6 313 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 SLC17A2O00624 439 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 CTDSPLO15194 276 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 GSTZ1O43708 216 aaPredicted RBP10.54□□□□□ -0.72
CLP1-205ENST00000533682 EIF1BO60739 113 aaKnown RBP10.54□□□□□ -0.72
CLP1-205ENST00000533682 CTAG2O75638 210 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 TCRBP04435 133 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 ABOP16442 354 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 ZNF17P17021 662 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 DCTDP32321 178 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 PER3P56645 1201 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 ZNF121P58317 390 aaPredicted RBP10.54□□□□□ -0.72
CLP1-205ENST00000533682 CSNK2A1P68400 391 aaPredicted RBP10.54□□□□□ -0.72
CLP1-205ENST00000533682 TAF13Q15543 124 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 RAB11BQ15907 218 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 TEX261Q6UWH6 196 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 BEST4Q8NFU0 473 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 OR4D6Q8NGJ1 314 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 OR1J2Q8NGS2 313 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 ADAMTS17Q8TE56 1095 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 RAB40AQ8WXH6 277 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 HYLS1Q96M11 299 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 CMTM3Q96MX0 182 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 ZMAT3Q9HA38 289 aaKnown RBP10.54□□□□□ -0.72
CLP1-205ENST00000533682 ZNF275Q9NSD4 429 aaPredicted RBP10.54□□□□□ -0.72
CLP1-205ENST00000533682 MCUBQ9NWR8 336 aa10.54□□□□□ -0.72
CLP1-205ENST00000533682 NKIRAS2Q9NYR9 191 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms