RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 GCNT4Q9P109 453 aa3.48□□□□□ -1.85
MARK3-220ENST00000560417 ST3GAL6Q9Y274 331 aa3.48□□□□□ -1.85
MARK3-220ENST00000560417 COL4A1P02462 1669 aa3.48□□□□□ -1.85
MARK3-220ENST00000560417 PLEKHG2Q9H7P9 1386 aa3.48□□□□□ -1.85
MARK3-220ENST00000560417 BRCA1P38398 1863 aaKnown RBP3.47□□□□□ -1.85
MARK3-220ENST00000560417 CACNA1SQ13698 1873 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 KIF13BQ9NQT8 1826 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 CIB4A0PJX0 185 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 SMCO2A6NFE2 343 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 RAB3DO95716 219 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 CALM1P0DP23 149 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 CALM2P0DP24 149 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 CALM3P0DP25 149 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 SFTPCP11686 197 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 DCKP27707 260 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 RAB9AP51151 201 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 MERTKQ12866 999 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 PRPSAP1Q14558 356 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 ZNF726P1Q15940 193 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 PGGHGQ32M88 737 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 LUZP2Q86TE4 346 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 LINC01551Q86U37 167 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 CMTM1Q8IZ96 169 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 C15orf56Q8N910 161 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 EXOSC8Q96B26 276 aaKnown RBP3.47□□□□□ -1.85
MARK3-220ENST00000560417 CREB3L1Q96BA8 519 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 IFI27L2Q9H2X8 130 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 SLC40A1Q9NP59 571 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 KCNJ16Q9NPI9 418 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 TBX21Q9UL17 535 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 RAB26Q9ULW5 256 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 NRXN2Q9P2S2 1712 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 PXDNLA1KZ92 1463 aa3.47□□□□□ -1.85
MARK3-220ENST00000560417 USP42Q9H9J4 1324 aaKnown RBP3.46□□□□□ -1.85
MARK3-220ENST00000560417 C10orf71Q711Q0 1435 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 DENND4AQ7Z401 1863 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 IGHV3-66A0A0C4DH42 116 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 SERTM2A0A1B0GWG4 89 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 SNAI2O43623 268 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 FGF4P08620 206 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 TLX1NBP0CAT3 122 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 MAS1LP35410 378 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 UBE2AP49459 152 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 ZNF138P52744 262 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 HERVK_113P61574 105 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 ZSCAN26Q16670 478 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 CCNJQ5T5M9 372 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 NOXO1Q8NFA2 376 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 OR2A1Q8NGT9 310 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 C8orf44Q96CB5 159 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 C11orf70Q9BRQ4 267 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 LYARQ9NX58 379 aaKnown RBP3.46□□□□□ -1.86
MARK3-220ENST00000560417 MTCH1Q9NZJ7 389 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 SLC17A4Q9Y2C5 497 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 TMED5Q9Y3A6 229 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 DLEC1Q9Y238 1755 aa3.46□□□□□ -1.86
MARK3-220ENST00000560417 ASTN1O14525 1302 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 CEP350Q5VT06 3117 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 PCNTO95613 3336 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 IGLV4-69A0A075B6H9 119 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 ANGPTL7O43827 346 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 CLDN11O75508 207 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 SERPINE2P07093 398 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 ACSM4P0C7M7 580 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 MYL2P10916 166 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 CDKN2BP42772 138 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 CYB561P49447 251 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 GGTLC2Q14390 218 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 WDR43Q15061 677 aaKnown RBP eCLIP3.45□□□□□ -1.86
MARK3-220ENST00000560417 OR7A5Q15622 319 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 HES5Q5TA89 166 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 OAFQ86UD1 273 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 GABRG1Q8N1C3 465 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 PQLC3Q8N755 202 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 CAPSLQ8WWF8 208 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 SEH1LQ96EE3 360 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 OR5B12Q96R08 314 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 SDHCQ99643 169 aaPredicted RBP3.45□□□□□ -1.86
MARK3-220ENST00000560417 BPIFA3Q9BQP9 254 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 RPP21Q9H633 154 aaKnown RBP3.45□□□□□ -1.86
MARK3-220ENST00000560417 AUNIPQ9H7T9 357 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 NOX3Q9HBY0 568 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 ISYNA1Q9NPH2 558 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 SAMSN1Q9NSI8 373 aaKnown RBP3.45□□□□□ -1.86
MARK3-220ENST00000560417 CCDC59Q9P031 241 aaKnown RBP3.45□□□□□ -1.86
MARK3-220ENST00000560417 KCNE3Q9Y6H6 103 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 ABCC12Q96J65 1359 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 ARFGEF2Q9Y6D5 1785 aa3.45□□□□□ -1.86
MARK3-220ENST00000560417 NUP98P52948 1817 aa3.44□□□□□ -1.86
MARK3-220ENST00000560417 LAMB2P55268 1798 aa3.44□□□□□ -1.86
MARK3-220ENST00000560417 ANKRD36CQ5JPF3 1778 aa3.44□□□□□ -1.86
MARK3-220ENST00000560417 IGHV3-74A0A0B4J1X5 117 aa3.44□□□□□ -1.86
MARK3-220ENST00000560417 ANKRD63C9JTQ0 380 aa3.44□□□□□ -1.86
MARK3-220ENST00000560417 INS-IGF2F8WCM5 200 aa3.44□□□□□ -1.86
MARK3-220ENST00000560417 SCAMP2O15127 329 aaKnown RBP3.44□□□□□ -1.86
MARK3-220ENST00000560417 NUPL2O15504 423 aaKnown RBP3.44□□□□□ -1.86
MARK3-220ENST00000560417 HUS1O60921 280 aa3.44□□□□□ -1.86
MARK3-220ENST00000560417 RETP07949 1114 aa3.44□□□□□ -1.86
MARK3-220ENST00000560417 ERCC1P07992 297 aaPredicted RBP3.44□□□□□ -1.86
MARK3-220ENST00000560417 OR5H8P0DN80 308 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms