RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 IL1AP01583 271 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 IGHV3-9P01782 118 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 CLEC2LP0C7M8 214 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 AGTR1P30556 359 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 SDC2P34741 201 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 KIR3DL2P43630 455 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 CCR9P51686 369 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 RPS11P62280 158 aaKnown RBP eCLIP11.51□□□□□ -0.57
PHGDH-221ENST00000641573 MFGE8Q08431 387 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-221ENST00000641573 TAF13Q15543 124 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 STK11Q15831 433 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 KRTAP21-3Q3LHN1 58 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 YIF1BQ5BJH7 314 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 WDR38Q5JTN6 314 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 KLHL24Q6TFL4 600 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 PAMR1Q6UXH9 720 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 UNQ9370/PRO34162Q6UXP9 181 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 FGD2Q7Z6J4 655 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 CATSPERDQ86XM0 798 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 LRRC18Q8N456 261 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 TBC1D15Q8TC07 691 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 RGP1Q92546 391 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-221ENST00000641573 GMPPAQ96IJ6 420 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-221ENST00000641573 FOXB1Q99853 325 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 MED18Q9BUE0 208 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 PNRC2Q9NPJ4 139 aaKnown RBP11.51□□□□□ -0.57
PHGDH-221ENST00000641573 GLRX2Q9NS18 164 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 SNTG1Q9NSN8 517 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 FBXL3Q9UKT7 428 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 GTF2A1LQ9UNN4 478 aa11.51□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 TMEM212A6NML5 194 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 AHRRA9YTQ3 701 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF878C9JN71 531 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF587BE7ETH6 402 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 RPL36A-HNRNPH2H7BZ11 118 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 SS18L1O75177 396 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-221ENST00000641573 GATBO75879 557 aaKnown RBP11.5□□□□□ -0.57
PHGDH-221ENST00000641573 CST2P09228 141 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 PRF1P14222 555 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 B4GALT1P15291 398 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 DCTDP32321 178 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 SOX6P35712 828 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 HIST1H3AP68431 136 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 MXD1Q05195 221 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF829Q3KNS6 432 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF404Q494X3 552 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 ACSF3Q4G176 576 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-221ENST00000641573 ZMAT1Q5H9K5 638 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 HIST2H3PS2Q5TEC6 136 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF585AQ6P3V2 769 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 HIST2H3AQ71DI3 136 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF676Q8N7Q3 588 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 GJC3Q8NFK1 279 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 IL17RDQ8NFM7 739 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 MCFD2Q8NI22 146 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 WNT2BQ93097 391 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 DACH2Q96NX9 599 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 SH3GL3Q99963 347 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 COMMD4Q9H0A8 199 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 PPIL3Q9H2H8 161 aaKnown RBP11.5□□□□□ -0.57
PHGDH-221ENST00000641573 UPB1Q9UBR1 384 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 SLC22A13Q9Y226 551 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 EMC9Q9Y3B6 208 aa11.5□□□□□ -0.57
PHGDH-221ENST00000641573 TMEM269A0A1B0GVZ9 245 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 SHISA3A0PJX4 238 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 LOC110117498-PIK3R3F6TDL0 507 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 CASKO14936 926 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 CALRP27797 417 aaKnown RBP11.49□□□□□ -0.57
PHGDH-221ENST00000641573 HSD11B1P28845 292 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 PEX19P40855 299 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 MTNR1BP49286 362 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 RORCP51449 518 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 PER3P56645 1201 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 ARF1P84077 181 aaKnown RBP11.49□□□□□ -0.57
PHGDH-221ENST00000641573 CCDC92Q53HC0 331 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-221ENST00000641573 KRTCAP3Q53RY4 240 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 FAM27D1Q5T7N8 215 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF324BQ6AW86 544 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-221ENST00000641573 RHOUQ7L0Q8 258 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 UBE2J2Q8N2K1 259 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 SLC22A24Q8N4F4 322 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 Q8NA96 180 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 PHYHIPQ92561 330 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 PPP1R14AQ96A00 147 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 FBXO17Q96EF6 278 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 OR14A2Q96R54 314 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 BARHL1Q9BZE3 327 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 NXF2Q9GZY0 626 aaKnown RBP11.49□□□□□ -0.57
PHGDH-221ENST00000641573 MMP27Q9H306 513 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 TPK1Q9H3S4 243 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 C12orf49Q9H741 205 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 NIPAL2Q9H841 368 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 G6PC2Q9NQR9 355 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 PRSS50Q9UI38 385 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 OR52A1Q9UKL2 312 aa11.49□□□□□ -0.57
PHGDH-221ENST00000641573 TRBV5-5A0A0J9YX44 114 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 A0A1W2PPK0 400 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 ZNF879B4DU55 563 aa11.48□□□□□ -0.57
PHGDH-221ENST00000641573 ARL6IP5O75915 188 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms