RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 LINC01590Q5TEZ4 76 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 FAM27BQ5VT28 67 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 CLEC18BQ6UXF7 455 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 MEPCEQ7L2J0 689 aaKnown RBP12.93□□□□□ -0.34
DDX56-208ENST00000467318 SSX8Q7RTT4 187 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 SLC22A24Q8N4F4 322 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 CLEC18CQ8NCF0 446 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 BBS1Q8NFJ9 593 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 OR51L1Q8NGJ5 315 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 OR6K6Q8NGW6 343 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 HTRA1Q92743 480 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 POLE4Q9NR33 117 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 USP9XQ93008 2570 aaPredicted RBP12.92□□□□□ -0.34
DDX56-208ENST00000467318 TRDV1A0A1B0GX56 115 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 RGS5O15539 181 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 CDRT1O95170 752 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 B4GALT1P15291 398 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 MSR1P21757 451 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 GALP22466 123 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 HOXC12P31275 282 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 GABRA5P31644 462 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 CDAP32320 146 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 CDH11P55287 796 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 LSM6P62312 80 aaKnown RBP12.92□□□□□ -0.34
DDX56-208ENST00000467318 SORDQ00796 357 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 DBPQ10586 325 aaPredicted RBP12.92□□□□□ -0.34
DDX56-208ENST00000467318 KCNMB1Q16558 191 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 SGCAQ16586 387 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 LCN1P1Q5VSP4 162 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 CCBE1Q6UXH8 406 aaPredicted RBP12.92□□□□□ -0.34
DDX56-208ENST00000467318 BCDIN3DQ7Z5W3 292 aaKnown RBP12.92□□□□□ -0.34
DDX56-208ENST00000467318 OR8H2Q8N162 312 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 KLHL36Q8N4N3 616 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 SLC26A10Q8NG04 563 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 BCL2L2Q92843 193 aaPredicted RBP12.92□□□□□ -0.34
DDX56-208ENST00000467318 NABP1Q96AH0 204 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 WACQ9BTA9 647 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 KCNN2Q9H2S1 579 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 OBP2BQ9NPH6 170 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 HAO2Q9NYQ3 351 aa12.92□□□□□ -0.34
DDX56-208ENST00000467318 OR5H1A6NKK0 313 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 FAM171A2A8MVW0 826 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 PPP3CBP16298 524 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 PTBP1P26599 531 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX56-208ENST00000467318 HTR1FP30939 366 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 GPR50Q13585 617 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 TBRG1Q3YBR2 411 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 TIMM23BQ5SRD1 257 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 DPPA2Q7Z7J5 298 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 GDPD1Q8N9F7 314 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 OR52N1Q8NH53 320 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 ZNRF4Q8WWF5 429 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 MOV10Q9HCE1 1003 aaKnown RBP12.91□□□□□ -0.34
DDX56-208ENST00000467318 KCNG2Q9UJ96 466 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 COL12A1Q99715 3063 aa12.91□□□□□ -0.34
DDX56-208ENST00000467318 A0A096LPE4 126 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 A0A1W2PPZ6 126 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 TMCC2O75069 709 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 TFP02787 698 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 ZNF823P16415 610 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 CFL1P23528 166 aaKnown RBP12.9□□□□□ -0.34
DDX56-208ENST00000467318 CAPZA2P47755 286 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 UBE2NP61088 152 aaKnown RBP12.9□□□□□ -0.34
DDX56-208ENST00000467318 BDH1Q02338 343 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 SCN1BQ07699 218 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 POU4F2Q12837 409 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 TSC22D1Q15714 1073 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 DDI2Q5TDH0 399 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 KLHL24Q6TFL4 600 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 METAP1DQ6UB28 335 aaPredicted RBP12.9□□□□□ -0.34
DDX56-208ENST00000467318 SYT9Q86SS6 491 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 OR10H5Q8NGA6 315 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 NANOS1Q8WY41 292 aaKnown RBP12.9□□□□□ -0.34
DDX56-208ENST00000467318 C11orf40Q8WZ69 217 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 ZMYND19Q96E35 227 aaPredicted RBP12.9□□□□□ -0.34
DDX56-208ENST00000467318 BARHL1Q9BZE3 327 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 ACTR6Q9GZN1 396 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 MARCH7Q9H992 704 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 NDRG3Q9UGV2 375 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 SF3B6Q9Y3B4 125 aaKnown RBP12.9□□□□□ -0.34
DDX56-208ENST00000467318 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
DDX56-208ENST00000467318 TENM4Q6N022 2769 aa12.9□□□□□ -0.34
DDX56-208ENST00000467318 SPTBN1Q01082 2364 aaKnown RBP12.9□□□□□ -0.34
DDX56-208ENST00000467318 ARPC4-TTLL3A0A0A6YYG9 625 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 MPZL1O95297 269 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 HLA-DPB1P04440 258 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 CST2P09228 141 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 SDC2P34741 201 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 PCBD1P61457 104 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 GGTLC2Q14390 218 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 SLC36A2Q495M3 483 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 HIKESHIQ53FT3 197 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 TEX30Q5JUR7 227 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 CD200R1LQ6Q8B3 271 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 SLC16A14Q7RTX9 510 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 SKA3Q8IX90 412 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 LRRC18Q8N456 261 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 ZNF511Q8NB15 262 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms