RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 NDRG3Q9UGV2 375 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 KLF2Q9Y5W3 355 aaPredicted RBP12.18□□□□□ -0.46
PRKN-205ENST00000366897 MSGN1A6NI15 193 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 TMEM127O75204 238 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 STK17BO94768 372 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 PMP2P02689 132 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 CD2P06729 351 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 PNMTP11086 282 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 RNH1P13489 461 aaKnown RBP12.18□□□□□ -0.46
PRKN-205ENST00000366897 GNB3P16520 340 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 AKR1C3P42330 323 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 RAB13P51153 203 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 B2MP61769 119 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 ETV3LQ6ZN32 361 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 ADGRE4PQ86SQ3 457 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 OR5T2Q8NGG2 359 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 NUDT9Q9BW91 350 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 SLC19A3Q9BZV2 496 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 OR11A1Q9GZK7 315 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 OR8D2Q9GZM6 311 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 HRH4Q9H3N8 390 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 FN3KRPQ9HA64 309 aa12.18□□□□□ -0.46
PRKN-205ENST00000366897 PNO1Q9NRX1 252 aaKnown RBP12.18□□□□□ -0.46
PRKN-205ENST00000366897 LOC107986453A0A1B0GWG9 222 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 SCDO00767 359 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 ZNF264O43296 627 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 UTS2O95399 124 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 CBR1P16152 277 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 SERPINF1P36955 418 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 KIR2DL1P43626 348 aaPredicted RBP12.17□□□□□ -0.46
PRKN-205ENST00000366897 CBX5P45973 191 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 EIF1AXP47813 144 aaKnown RBP12.17□□□□□ -0.46
PRKN-205ENST00000366897 SCAND1P57086 179 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 ZP2Q05996 745 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 RBM39Q14498 530 aaKnown RBP12.17□□□□□ -0.46
PRKN-205ENST00000366897 ZNF345Q14585 488 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 SLC18B1Q6NT16 456 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 CCDC36Q8IYA8 594 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 ZSCAN1Q8NBB4 408 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 SMRP1Q8NCR6 262 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 RNF128Q8TEB7 428 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 MMABQ96EY8 250 aaPredicted RBP12.17□□□□□ -0.46
PRKN-205ENST00000366897 EDEM2Q9BV94 578 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 P2RY10O00398 339 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 TXNDC12O95881 172 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 CRYBA1P05813 215 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 SLC25A4P12235 298 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 FMODQ06828 376 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 CCDC157Q569K6 752 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 VWA2Q5GFL6 755 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 NKAPLQ5M9Q1 402 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 RAB11FIP2Q7L804 512 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 ARMC10Q8N2F6 343 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 MARCH1Q8TCQ1 289 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 FOXRED1Q96CU9 486 aaPredicted RBP12.17□□□□□ -0.46
PRKN-205ENST00000366897 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
PRKN-205ENST00000366897 SLC22A11Q9NSA0 550 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 CD207Q9UJ71 328 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 PCOLCE2Q9UKZ9 415 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 C2orf16Q68DN1 1984 aa12.17□□□□□ -0.46
PRKN-205ENST00000366897 ICOSLGO75144 302 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 ADAP1O75689 374 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 HLA-DOBP13765 273 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 HOXB2P14652 356 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 RIDAP52758 137 aaKnown RBP12.16□□□□□ -0.46
PRKN-205ENST00000366897 ZNF528Q3MIS6 628 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 TAF8Q7Z7C8 310 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 ZNF615Q8N8J6 731 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 OR4K17Q8NGC6 315 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 FGF14Q92915 247 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 UBQLN4Q9NRR5 601 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 CENPMQ9NSP4 180 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 ATPIF1Q9UII2 106 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
PRKN-205ENST00000366897 PRSS37A4D1T9 235 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 C17orf105B2RV13 164 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 H0YIZ8 118 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 MBTPS2O43462 519 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 GNALP38405 381 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 HOXA1P49639 335 aaPredicted RBP12.16□□□□□ -0.46
PRKN-205ENST00000366897 ZNF117Q03924 483 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 SLC9A3R2Q15599 337 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 SMAD2Q15796 467 aaKnown RBP12.16□□□□□ -0.46
PRKN-205ENST00000366897 PARM1Q6UWI2 310 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 FOXRED2Q8IWF2 684 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
PRKN-205ENST00000366897 FBXO17Q96EF6 278 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 PIK3IP1Q96FE7 263 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 PHB2Q99623 299 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 PTGES2Q9H7Z7 377 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 CNTD2Q9H8S5 307 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 SCPEP1Q9HB40 452 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 CYB5R1Q9UHQ9 305 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 DOCK8Q8NF50 2099 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 RAB27BO00194 218 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 CD74P04233 296 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 MELTFP08582 738 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 IL11P20809 199 aa12.16□□□□□ -0.46
PRKN-205ENST00000366897 CXCR1P25024 350 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms