RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 INTS14Q96SY0 518 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 SH3GL3Q99963 347 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 ACOT13Q9NPJ3 140 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 NPAP1Q9NZP6 1156 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 COA3Q9Y2R0 106 aaPredicted RBP13.52□□□□□ -0.25
SS18-216ENST00000580751 COMMD3-BMI1R4GMX3 469 aa13.52□□□□□ -0.25
SS18-216ENST00000580751 ZNF503-AS2A6NEH8 195 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 C12orf71A8MTZ7 269 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 IGKV3-15P01624 115 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 MT-ND2P03891 347 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 TFAP2AP05549 437 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 CST2P09228 141 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 GAAP10253 952 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 ATP6V1B1P15313 513 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 CBR1P16152 277 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 ZNF823P16415 610 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 PCMT1P22061 227 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 PTAFRP25105 342 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 PCBD1P61457 104 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 LSM6P62312 80 aaKnown RBP13.51□□□□□ -0.25
SS18-216ENST00000580751 ACTA2P62736 377 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 ACTG2P63267 376 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 TLE4Q04727 773 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 NCMAPQ5T1S8 102 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 UBE2UQ5VVX9 321 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 TMEM53Q6P2H8 277 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 TMPRSS11AQ6ZMR5 421 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 KCTD8Q6ZWB6 473 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 RHOUQ7L0Q8 258 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 KCTD20Q7Z5Y7 419 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 MDP1Q86V88 176 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 LRRC18Q8N456 261 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 NANOGP1Q8N7R0 232 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 OR4F15Q8NGB8 312 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 ZNRF4Q8WWF5 429 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 ASB17Q8WXJ9 295 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 PIK3IP1Q96FE7 263 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 PLPPR2Q96GM1 343 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 RHNO1Q9BSD3 238 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 C1QTNF6Q9BXI9 259 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 WDR76Q9H967 626 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 B3GNT2Q9NY97 397 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 ZNF224Q9NZL3 707 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 CRNNQ9UBG3 495 aaPredicted RBP13.51□□□□□ -0.25
SS18-216ENST00000580751 CAB39Q9Y376 341 aaPredicted RBP13.51□□□□□ -0.25
SS18-216ENST00000580751 TACC2O95359 2948 aa13.51□□□□□ -0.25
SS18-216ENST00000580751 HRNRQ86YZ3 2850 aaPredicted RBP13.5□□□□□ -0.25
SS18-216ENST00000580751 DAPL1A0PJW8 107 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 FAM221AA4D161 298 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 ZNF670-ZNF695F2Z2N8 137 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 M0R1B8 84 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 SIAH2O43255 324 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 CTAG2O75638 210 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 IGLV1-44P01699 117 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 HLA-DQA2P01906 255 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 CD3EP07766 207 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 ALDH3B2P48448 385 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 ENTPD1P49961 510 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 RAB1AP62820 205 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 PIGFQ07326 219 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 BSPH1Q075Z2 132 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 MRPL28Q13084 256 aaKnown RBP13.5□□□□□ -0.25
SS18-216ENST00000580751 GALEQ14376 348 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 ZNF367Q7RTV3 350 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 SYT9Q86SS6 491 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 TMEM200AQ86VY9 491 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 SLC35F2Q8IXU6 374 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 SYS1Q8N2H4 156 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 OR10H5Q8NGA6 315 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 OR51L1Q8NGJ5 315 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 OTOSQ8NHW6 89 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 SGCDQ92629 289 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 RORBQ92753 470 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 FOXN4Q96NZ1 517 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 ZNF416Q9BWM5 594 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 RNF121Q9H920 327 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 EMC7Q9NPA0 242 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 ISYNA1Q9NPH2 558 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 ERVK13-1Q9NX77 482 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 NDUFA13Q9P0J0 144 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 POLR1DQ9Y2S0 133 aa13.5□□□□□ -0.25
SS18-216ENST00000580751 ITPR2Q14571 2701 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 MYL12BO14950 172 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 SULT1C4O75897 302 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 MMP7P09237 267 aaPredicted RBP13.49□□□□□ -0.25
SS18-216ENST00000580751 LIMS3P0CW19 117 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 LIMS4P0CW20 117 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 ALOX5APP20292 161 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 CD40P25942 277 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 IDH3GP51553 393 aaPredicted RBP13.49□□□□□ -0.25
SS18-216ENST00000580751 BDH1Q02338 343 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 EGR3Q06889 387 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 ACSM1Q08AH1 577 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 SCRN3Q0VDG4 424 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 AQP6Q13520 282 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 SPHARQ15513 63 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 SYT6Q5T7P8 510 aaPredicted RBP13.49□□□□□ -0.25
SS18-216ENST00000580751 XAF1Q6GPH4 301 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 SLC18B1Q6NT16 456 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 DEGS2Q6QHC5 323 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms