RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 KRT33AO76009 404 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 GABARAPO95166 117 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ABHD16AO95870 558 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 SERPINA3P01011 423 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 CGAP01215 116 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 HLA-DQA2P01906 255 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 HLA-DPB1P04440 258 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ISG15P05161 165 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 GYPBP06028 91 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 TPOP07202 933 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 TMIGD3P0DMS9 266 aaPredicted RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 KLK2P20151 261 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 PSMB1P20618 241 aaKnown RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 AGAP20933 346 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 FGF9P31371 208 aaPredicted RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 PYCR1P32322 319 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 NTF4P34130 210 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ARR3P36575 388 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 OPRL1P41146 370 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 CA7P43166 264 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ETV1P50549 477 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 RIDAP52758 137 aaKnown RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 GP2P55259 537 aaKnown RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 PER3P56645 1201 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 SIRPAP78324 504 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ROR2Q01974 943 aaKnown RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ZNF85Q03923 595 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 RAB39AQ14964 217 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ZNF829Q3KNS6 432 aaPredicted RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 FBXL19-AS1Q494R0 122 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 SLC36A2Q495M3 483 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ARMCX4Q5H9R4 360 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 TSPO2Q5TGU0 170 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 RTL6Q6ICC9 239 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 PAMR1Q6UXH9 720 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 LINC00299Q6ZSB3 139 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 DPY19L4Q7Z388 723 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 MRGPRGQ86SM5 289 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 CD163Q86VB7 1156 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 DOLPP1Q86YN1 238 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 PHC2Q8IXK0 858 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 SLC22A24Q8N4F4 322 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 C9orf106Q8NAJ2 232 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 GALNT11Q8NCW6 608 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 OR6N2Q8NGY6 317 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 OR2AJ1Q8NGZ0 328 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ZNRF4Q8WWF5 429 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 C11orf40Q8WZ69 217 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 UFD1Q92890 307 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 SMIM19Q96E16 107 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 YIPF6Q96EC8 236 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 TRIB1Q96RU8 372 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 DCLRE1CQ96SD1 692 aaKnown RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 MDFIQ99750 246 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ABHD6Q9BV23 337 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 RBM38Q9H0Z9 239 aaKnown RBP5.71□□□□□ -1.5
CDCA3-205ENST00000535871 IFT22Q9H7X7 185 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 SLC7A10Q9NS82 523 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ASF1BQ9NVP2 202 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 ELOVL5Q9NYP7 299 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 TIMM10BQ9Y5J6 103 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 FAM215AQ9Y5M1 114 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 SHANK1Q9Y566 2161 aa5.71□□□□□ -1.5
CDCA3-205ENST00000535871 NBASA2RRP1 2371 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 IGKV1D-43A0A0B4J1Z2 117 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 A0A1B0GUH1 482 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 OR6C6A6NF89 314 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 H7C1C5 153 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 TMPRSS2O15393 492 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 NOL3O60936 208 aaKnown RBP5.7□□□□□ -1.5
CDCA3-205ENST00000535871 UPK3AO75631 287 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 INMTO95050 263 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 UBL3O95164 117 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 RAF1P04049 648 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 GLI4P10075 376 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 PPP3CBP16298 524 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 ZNF12P17014 697 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 MAPK3P27361 379 aaPredicted RBP5.7□□□□□ -1.5
CDCA3-205ENST00000535871 PSMB9P28065 219 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 PEX19P40855 299 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 MAP2K3P46734 347 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 LCN6P62502 163 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 TUBA1BP68363 451 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 FMODQ06828 376 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 ENDOGQ14249 297 aaKnown RBP5.7□□□□□ -1.5
CDCA3-205ENST00000535871 CDK5R1Q15078 307 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 RAB35Q15286 201 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 MED22Q15528 200 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 NEDD8Q15843 81 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 ETFDHQ16134 617 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 CEACAM16Q2WEN9 425 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 KRTAP27-1Q3LI81 207 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 YIF1BQ5BJH7 314 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 LIPNQ5VXI9 398 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 DMKNQ6E0U4 476 aaPredicted RBP5.7□□□□□ -1.5
CDCA3-205ENST00000535871 ZNF585AQ6P3V2 769 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 PCSK4Q6UW60 755 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 DRAM2Q6UX65 266 aa5.7□□□□□ -1.5
CDCA3-205ENST00000535871 UNQ6126/PRO20091Q6UXV3 157 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms