RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CATSPERDQ86XM0 798 aa21.45■■□□□ 1.02
PPP1R3F-205ENST00000495799 OR10S1Q8NGN2 331 aa21.45■■□□□ 1.02
PPP1R3F-205ENST00000495799 HTRA1Q92743 480 aa21.45■■□□□ 1.02
PPP1R3F-205ENST00000495799 C12orf49Q9H741 205 aa21.45■■□□□ 1.02
PPP1R3F-205ENST00000495799 DDX28Q9NUL7 540 aaKnown RBP21.45■■□□□ 1.02
PPP1R3F-205ENST00000495799 GTF2A1LQ9UNN4 478 aa21.45■■□□□ 1.02
PPP1R3F-205ENST00000495799 TMEM269A0A1B0GVZ9 245 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 CLPXO76031 633 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 CDRT1O95170 752 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 B4GALT1P15291 398 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 FBXW9Q5XUX1 488 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 ZNF627Q7L945 461 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 SLC16A14Q7RTX9 510 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 PRSS35Q8N3Z0 413 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 CISD2Q8N5K1 135 aaKnown RBP21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 FAM57AQ8TBR7 257 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 PNRC2Q9NPJ4 139 aaKnown RBP21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 MALT1Q9UDY8 824 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 OR52A1Q9UKL2 312 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 A3GALT2U3KPV4 340 aa21.44■■□□□ 1.02
PPP1R3F-205ENST00000495799 SPTBN4Q9H254 2564 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 CASKO14936 926 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 SRSF10O75494 262 aaKnown RBP21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 APOC1P02654 83 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 ABOP16442 354 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 MTNR1BP49286 362 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 RORCP51449 518 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 PSMA6P60900 246 aaKnown RBP21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 FAPQ12884 760 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 GUSBP1Q15486 140 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 ZMAT1Q5H9K5 638 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 ELFN2Q5R3F8 820 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 C1orf185Q5T7R7 199 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 ZNF704Q6ZNC4 412 aaPredicted RBP21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 OR6K3Q8NGY3 331 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 DCLRE1CQ96SD1 692 aaKnown RBP21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 ATF6BQ99941 703 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 HDHD2Q9H0R4 259 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 CXorf56Q9H5V9 222 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 FBXL3Q9UKT7 428 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 CFAP47Q6ZTR5 3102 aa21.43■■□□□ 1.02
PPP1R3F-205ENST00000495799 MBD3L4A6NDZ8 208 aaPredicted RBP21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 MBD3L3A6NE82 208 aaPredicted RBP21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 MBD3L5A6NJ08 208 aaPredicted RBP21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 ZNF879B4DU55 563 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 SFTPCP11686 197 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 MPGP29372 298 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 KIR3DL2P43630 455 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 TDGF1P3P51864 188 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 RPS11P62280 158 aaKnown RBP eCLIP21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 ARF1P84077 181 aaKnown RBP21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 ECH1Q13011 328 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 RAB35Q15286 201 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 BCL2L15Q5TBC7 163 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 LINC00299Q6ZSB3 139 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 C9orf106Q8NAJ2 232 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 MBD3L2Q8NHZ7 208 aaPredicted RBP21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 GPR148Q8TDV2 347 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 FBXO17Q96EF6 278 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 ZFP3Q96NJ6 502 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 DACH2Q96NX9 599 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 KCNJ15Q99712 375 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 SH3GL3Q99963 347 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 PLEK2Q9NYT0 353 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 TIMM10BQ9Y5J6 103 aa21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 PHF3Q92576 2039 aaKnown RBP21.42■■□□□ 1.02
PPP1R3F-205ENST00000495799 ZNHIT1O43257 154 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 CNOT4O95628 575 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 CRHP06850 196 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 UBCP0CG48 685 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 CTSSP25774 331 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 CALRP27797 417 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 SDC2P34741 201 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 RPS19P39019 145 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 PER3P56645 1201 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 MFGE8Q08431 387 aaPredicted RBP21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 Q499Y3 187 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 UNQ9370/PRO34162Q6UXP9 181 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 DPPA2Q7Z7J5 298 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 CD163Q86VB7 1156 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 SLIRPQ9GZT3 109 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 PRORYQ9H606 182 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 SNTG1Q9NSN8 517 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 PRSS50Q9UI38 385 aa21.41■■□□□ 1.02
PPP1R3F-205ENST00000495799 MED19A0JLT2 244 aaPredicted RBP21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 ACOD1A6NK06 481 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 SGCEO43556 437 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 PNPP00491 289 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 KLRB1Q12918 225 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 INSL4Q14641 139 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 ZNF404Q494X3 552 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 SLC36A2Q495M3 483 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 CCDC92Q53HC0 331 aaPredicted RBP21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 TMEM244Q5VVB8 128 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 TPRA1Q86W33 373 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 GCNT2Q8N0V5 402 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 KDF1Q8NAX2 398 aaPredicted RBP21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 IL17RDQ8NFM7 739 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 OR13C5Q8NGS8 318 aa21.4■■□□□ 1.02
PPP1R3F-205ENST00000495799 MCFD2Q8NI22 146 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms