RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CTXN1P60606 82 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 RPS7P62081 194 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 NCS1P62166 190 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 ACTA2P62736 377 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 ACTG2P63267 376 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 BSPH1Q075Z2 132 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 ZP4Q12836 540 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 MRPL28Q13084 256 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF846Q147U1 533 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 KLHL12Q53G59 568 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 NCMAPQ5T1S8 102 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 FAM205BPQ63HN1 556 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 ADAM5Q6NVV9 412 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 CD200R1LQ6Q8B3 271 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 FAM122BQ7Z309 247 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 SYS1Q8N2H4 156 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 LRRC17Q8N6Y2 441 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 OR4F15Q8NGB8 312 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 OR51G2Q8NGK0 314 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 OR2T4Q8NH00 348 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 OR4K13Q8NH42 304 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 MFSD8Q8NHS3 518 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 NDNFQ8TB73 568 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 SLC25A43Q8WUT9 341 aaPredicted RBP8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 HTRA1Q92743 480 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 RPL3LQ92901 407 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 TAAR8Q969N4 342 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 KTI12Q96EK9 354 aaPredicted RBP8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 MOGAT1Q96PD6 335 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 CNN2Q99439 309 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 CHCHD6Q9BRQ6 235 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF649Q9BS31 505 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 KATNB1Q9BVA0 655 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 NXF2Q9GZY0 626 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 OR51V1Q9H2C8 321 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 ADGRL4Q9HBW9 690 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 TRIM36Q9NQ86 728 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 BABAM2Q9NXR7 383 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 NPAP1Q9NZP6 1156 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 CRNNQ9UBG3 495 aaPredicted RBP8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 STAB1Q9NY15 2570 aa8.23□□□□□ -1.09
TMEM39A-208ENST00000486159 A0A075B6Q4 140 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 ARPC4-TTLL3A0A0A6YYG9 625 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 LOC100506127A0A0U1RQW1 187 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 TMEM72A0PK05 275 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 A6NIZ1 184 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 C12orf71A8MTZ7 269 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 CLDN25C9JDP6 229 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 OVOL3O00110 214 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 GPX5O75715 221 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 GLCEO94923 617 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 IL1AP01583 271 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 IGHV4-39P01824 125 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 YES1P07947 543 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 PPP3CBP16298 524 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 NR4A1P22736 598 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 IGHV1-2P23083 117 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 IDUAP35475 653 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 CRYBB2P43320 205 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 RPS5P46782 204 aaKnown RBP8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 SLC16A1P53985 500 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 RAP1BP61224 184 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 LSM3P62310 102 aaKnown RBP8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 RAP1AP62834 184 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 ERVK-25P63136 954 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 RPL18Q07020 188 aaKnown RBP8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 SPOCK1Q08629 439 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 STK11Q15831 433 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 CLEC12BQ2HXU8 276 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 ZNF404Q494X3 552 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 PDSS1Q5T2R2 415 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 BHLHA15Q7RTS1 189 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 KCTD20Q7Z5Y7 419 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 LHFPL3Q86UP9 236 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 ADPRHL1Q8NDY3 354 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 STEAP2Q8NFT2 490 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 OR6Q1Q8NGQ2 317 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 MOSPD2Q8NHP6 518 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 MCFD2Q8NI22 146 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 SMAP2Q8WU79 429 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 GATAD2BQ8WXI9 593 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 HPS1Q92902 700 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 CPNE4Q96A23 557 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 OR5B2Q96R09 309 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 PTDSS2Q9BVG9 487 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 ALG8Q9BVK2 526 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 SLIRPQ9GZT3 109 aaKnown RBP8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 OR51E2Q9H255 320 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 FANCFQ9NPI8 374 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 INIPQ9NRY2 104 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 GLRX2Q9NS18 164 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 PAQR5Q9NXK6 330 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 RNF115Q9Y4L5 304 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 PEX16Q9Y5Y5 336 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 ZANQ9Y493 2812 aa8.22□□□□□ -1.09
TMEM39A-208ENST00000486159 JMJD1CQ15652 2540 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 TEX13CA0A0J9YWL9 993 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 PNMA8CA0A1B0GUJ8 204 aa8.21□□□□□ -1.1
TMEM39A-208ENST00000486159 A0A1W2PRG6 482 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms