RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 COMMD4Q9H0A8 199 aa20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 SNTG1Q9NSN8 517 aa20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 DDX28Q9NUL7 540 aaKnown RBP20.12■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF587BE7ETH6 402 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 CLEC2LP0C7M8 214 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 B4GALT1P15291 398 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 MMP16P51512 607 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 FAM27D1Q5T7N8 215 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 SLC22A24Q8N4F4 322 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 SLC25A46Q96AG3 418 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 BARHL1Q9BZE3 327 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 NIPAL2Q9H841 368 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 G6PC2Q9NQR9 355 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 SLC22A13Q9Y226 551 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 EMC9Q9Y3B6 208 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 A3GALT2U3KPV4 340 aa20.11■□□□□ 0.81
SMARCB1-201ENST00000263121 LOC110117498-PIK3R3F6TDL0 507 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 UCHL1P09936 223 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 SOX6P35712 828 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 MTNR1BP49286 362 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 MXD1Q05195 221 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF829Q3KNS6 432 aaPredicted RBP20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF404Q494X3 552 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF627Q7L945 461 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF676Q8N7Q3 588 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 MCFD2Q8NI22 146 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 PHYHIPQ92561 330 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 OR14A2Q96R54 314 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 SH3GL3Q99963 347 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 FAM206AQ9NX38 181 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 UPB1Q9UBR1 384 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 CACNA1GO43497 2377 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 SPENQ96T58 3664 aaKnown RBP20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 CACNA1CQ13936 2221 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 TRBV5-5A0A0J9YX44 114 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 TMEM269A0A1B0GVZ9 245 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 CALRP27797 417 aaKnown RBP20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 OR3A2P47893 321 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 CCDC92Q53HC0 331 aaPredicted RBP20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 NSUN5P2Q63ZY6 315 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 KLHL24Q6TFL4 600 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 LINC00299Q6ZSB3 139 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 C9orf106Q8NAJ2 232 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 C12orf49Q9H741 205 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 OR52A1Q9UKL2 312 aa20.1■□□□□ 0.81
SMARCB1-201ENST00000263121 IGF2RP11717 2491 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 NCOA6Q14686 2063 aaPredicted RBP20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF879B4DU55 563 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 CTSSP25774 331 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 RORCP51449 518 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 PSMA6P60900 246 aaKnown RBP20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 GRB2P62993 217 aaKnown RBP20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF585AQ6P3V2 769 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 ZNF813Q6ZN06 617 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 PPP1R14AQ96A00 147 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 MMP27Q9H306 513 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 TPK1Q9H3S4 243 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 MALT1Q9UDY8 824 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 PRSS50Q9UI38 385 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 GTF2A1LQ9UNN4 478 aa20.09■□□□□ 0.81
SMARCB1-201ENST00000263121 MED12LQ86YW9 2145 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 CASKO14936 926 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 HSD11B1P28845 292 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 TDGF1P3P51864 188 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 FOXG1P55316 489 aaPredicted RBP20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 ARF1P84077 181 aaKnown RBP20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 SF3B4Q15427 424 aaKnown RBP eCLIP20.08■□□□□ 0.813e-8■■■■□ 24.1
SMARCB1-201ENST00000263121 TAF13Q15543 124 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 Q499Y3 187 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 ELFN2Q5R3F8 820 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 FAM214BQ7L5A3 538 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 SYT9Q86SS6 491 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 RDH10Q8IZV5 341 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 DERL3Q96Q80 235 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 ATF6BQ99941 703 aa20.08■□□□□ 0.81
SMARCB1-201ENST00000263121 ARHGAP21Q5T5U3 1957 aa20.08■□□□□ 0.8
SMARCB1-201ENST00000263121 ARL6IP5O75915 188 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 PEX19P40855 299 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 FAPQ12884 760 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 FBXW9Q5XUX1 488 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 OR2A2Q6IF42 318 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 SKA3Q8IX90 412 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 GCNT2Q8N0V5 402 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 UBE2J2Q8N2K1 259 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 CISD2Q8N5K1 135 aaKnown RBP20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 OR10AC1Q8NH08 325 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 GPR148Q8TDV2 347 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 WACQ9BTA9 647 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 SLC5A6Q9Y289 635 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 TRAV1-2A0A0B4J238 106 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 PIN1P1O15428 100 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 GABRA1P14867 456 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 MYL9P24844 172 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 SCRN3Q0VDG4 424 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 HNRNPA0Q13151 305 aaKnown RBP20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 ODF4Q2M2E3 257 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 BCL2L15Q5TBC7 163 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 ABHD12BQ7Z5M8 362 aaPredicted RBP20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 OR6Q1Q8NGQ2 317 aa20.07■□□□□ 0.8
SMARCB1-201ENST00000263121 KCNJ15Q99712 375 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms