RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 ADAMTSL4Q6UY14 1074 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 KCNRGQ8N5I3 272 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 CLEC1AQ8NC01 280 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 ACBD4Q8NC06 268 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 GPR148Q8TDV2 347 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 PHYHIPQ92561 330 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 MRPL38Q96DV4 380 aaKnown RBP9.34□□□□□ -0.91
FOXN1-201ENST00000226247 MARS2Q96GW9 593 aaKnown RBP9.34□□□□□ -0.91
FOXN1-201ENST00000226247 AMELYQ99218 206 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 KXD1Q9BQD3 176 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 TRIM2Q9C040 744 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 SRMSQ9H3Y6 488 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 CRLF2Q9HC73 371 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 SMCO4Q9NRQ5 59 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 UPB1Q9UBR1 384 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 PISDQ9UG56 409 aa9.34□□□□□ -0.91
FOXN1-201ENST00000226247 FREM3P0C091 2139 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CXorf51AA0A1B0GTR3 108 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 C5orf52A6NGY3 159 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 ZNF729A6NN14 1252 aaPredicted RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 MED6O75586 246 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 WNT11O96014 354 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SNRPCP09234 159 aaKnown RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 OR8U8P0C7N1 319 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 THEGLP0DJG4 465 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 ABOP16442 354 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 LAP3P28838 519 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 MAP3K8P41279 467 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 IL13RA1P78552 427 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SURF2Q15527 256 aaPredicted RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 RAB11BQ15907 218 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 ZNF585AQ6P3V2 769 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 BEND4Q6ZU67 534 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 MISPQ8IVT2 679 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 ARMC10Q8N2F6 343 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 HIST1H2BAQ96A08 127 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 FAM46BQ96A09 425 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SFXN1Q9H9B4 322 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 RHOFQ9HBH0 211 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 TNFSF18Q9UNG2 199 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CABIN1Q9Y6J0 2220 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 EML5Q05BV3 1969 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 A0A087X0M5 115 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 A0A1B0GX30 115 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 RNF222A6NCQ9 220 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 C11orf98E9PRG8 122 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 ZNF208O43345 1280 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CDC40O60508 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 PLGP00747 810 aaPredicted RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CSTAP01040 98 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CEBPBP17676 345 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CASRP41180 1078 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 GRK6P43250 576 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SGCGQ13326 291 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SLC22A6Q4U2R8 563 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 LINC01590Q5TEZ4 76 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 LILRA6Q6PI73 481 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 ACOT7LQ6ZUV0 252 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 OR4A4PQ8NGN8 299 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 ZNF417Q8TAU3 575 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SP7Q8TDD2 431 aaPredicted RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CMBLQ96DG6 245 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 NECAB3Q96P71 396 aaPredicted RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SLC6A7Q99884 636 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 MFRPQ9BY79 579 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 FAM117AQ9C073 453 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SYT4Q9H2B2 425 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 PHPT1Q9NRX4 125 aaPredicted RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 LRIT1Q9P2V4 623 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CACNA1EQ15878 2313 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 COLCA2A8K830 154 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 C1QTNF3-AMACRE9PGA6 284 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 IGKV1D-16P01601 117 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 EDN3P14138 238 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CD1CP29017 333 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 MECP2P51608 486 aaKnown RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SPOCK1Q08629 439 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 ERV3-1Q14264 604 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 GAMTQ14353 236 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CEBPEQ15744 281 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 PYY3Q5JQD4 70 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 DPY19L2P2Q6ZN68 376 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 GVQW1Q8N7I0 195 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 UBAC2Q8NBM4 344 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 OR4C3Q8NH37 302 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 CCL4L1Q8NHW4 92 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 WFIKKN2Q8TEU8 576 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 RAB3CQ96E17 227 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SEH1LQ96EE3 360 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 SPACA7Q96KW9 195 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 MOGAT1Q96PD6 335 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 RPP25Q9BUL9 199 aaKnown RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 DUSP22Q9NRW4 184 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 DNAJB12Q9NXW2 375 aaKnown RBP9.33□□□□□ -0.92
FOXN1-201ENST00000226247 GSKIPQ9P0R6 139 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 KCNG2Q9UJ96 466 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 TMED7Q9Y3B3 224 aa9.33□□□□□ -0.92
FOXN1-201ENST00000226247 TICRRQ7Z2Z1 1910 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms