RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 RhagQ9QUT0 438 aa8.9□□□□□ -0.98
Hmgb1-201ENSMUST00000085546 Insl6Q9QY05 191 aa8.9□□□□□ -0.98
Hmgb1-201ENSMUST00000085546 LipgQ9WVG5 500 aa8.9□□□□□ -0.98
Hmgb1-201ENSMUST00000085546 Mocs2Q9Z223 189 aa8.9□□□□□ -0.98
Hmgb1-201ENSMUST00000085546 Gm20518E9Q548 580 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Zbtb25G3UW50 439 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Cdhr4H3BJZ2 783 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Zfp13P10754 512 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Cbr1P48758 277 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Tbx5P70326 518 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Pnpla5Q32LZ8 432 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Slc38a11Q3USY0 453 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Pla2g7Q60963 440 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Znf250Q7TNU6 535 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr20Q7TRX9 314 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Slc39a9Q8BFU1 308 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 ExogQ8C163 368 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Fbxl22Q8C7B6 236 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr1347Q8VF33 319 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr1279Q8VF38 313 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr1030Q8VFL5 318 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr825Q8VFU7 320 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Fubp1Q91WJ8 651 aaKnown RBP8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Necab3Q9D6J4 353 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Mmp1bQ9EPL6 463 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Syt11Q9R0N3 430 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Slc25a14Q9Z2B2 325 aa8.9□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Plxna1P70206 1894 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Ighv1-24A0A0A6YY24 117 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 4930558K02RikE0CXC6 182 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 ChadlE9Q7T7 748 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Gfi1bO70237 330 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Agr2O88312 175 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 OtcP11725 354 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Selenbp1P17563 472 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Fcer1aP20489 250 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Gp1bbP56400 206 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 PtpaP58389 323 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 H2al1nQ497L1 109 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Gm527Q4KL13 310 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Xkr7Q5GH64 580 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Tle4Q62441 773 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Selenbp2Q63836 472 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Sidt1Q6AXF6 827 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 PdgfrlQ6PE55 375 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Flrt1Q6RKD8 674 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Mvb12aQ78HU3 271 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Cdk3Q80YP0 303 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Tmprss7Q8BIK6 829 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Zfp947Q8BIQ6 437 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Cbln4Q8BME9 198 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Q8BPC6 396 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 DrgxQ8BYH0 263 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Ncr1Q8C567 325 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Tceal5Q8CCT4 200 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Timd2Q8R183 305 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr1019Q8VGS3 310 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Trappc5Q9CQA1 188 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Mrpl21Q9D1N9 209 aaKnown RBP8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Tmem126bQ9D1R1 230 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr154Q9QY00 318 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Cldn15Q9Z0S5 227 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 RfxankQ9Z205 269 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Susd1E9Q3H4 752 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Vmn1r113G3UWI8 307 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Fkbp8O35465 402 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Prph2P15499 346 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 VtnP29788 478 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Pax4P32115 349 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Rps15P62843 145 aaKnown RBP8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 CycsP62897 105 aaKnown RBP8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Smad5P97454 465 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 ShbgP97497 403 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 RelbQ04863 558 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Dusp5Q1HL35 384 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Tespa1Q3U132 458 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Psg26Q4KL65 475 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Dvl2Q60838 736 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Adora3Q61618 319 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Sf3a2Q62203 475 aaKnown RBP8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Snrnp70Q62376 448 aaKnown RBP8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Arl5cQ6P068 179 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Sec22aQ8BH47 307 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Ablim2Q8BL65 612 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Q8BR90 294 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr781Q8VFZ8 311 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr1413Q8VGU3 323 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Frs3Q91WJ0 492 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Nkx6-1Q99MA9 365 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Tmem100Q9CQG9 134 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Q9DAE8 263 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Olfr705Q9EPF7 316 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Slc2a8Q9JIF3 477 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 IckQ9JKV2 629 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Ppm1dQ9QZ67 598 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Khdrbs2Q9WU01 349 aa8.89□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Gm45213A0A0U1RNZ6 101 aa8.88□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Gm10718D3Z1I7 227 aa8.88□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Efna4O08542 206 aa8.88□□□□□ -0.99
Hmgb1-201ENSMUST00000085546 Agpat1O35083 285 aa8.88□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms