RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 CK137956B1AYM9 596 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Sp100O35892 482 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 P01661 131 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 P01662 111 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 P01663 111 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Nos3P70313 1202 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Bpifa1P97361 278 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Acsf3Q3URE1 583 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Fut10Q5F2L2 481 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Kcnc3Q63959 769 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tbccd1Q640P7 552 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1126Q7TR49 314 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Klhl13Q80TF4 654 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Lpar4Q8BLG2 370 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Lrfn5Q8BXA0 719 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Lrp11Q8CB67 483 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Gpat4Q8K2C8 456 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 RergQ8R367 199 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr131Q8VGC8 314 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Sfxn1Q99JR1 322 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Commd4Q9CQ02 199 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 1700034E13RikQ9D2T6 108 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ca13Q9D6N1 262 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Galnt16Q9JJ61 558 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Slc39a1Q9QZ03 324 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Usp18Q9WTV6 368 aa12.2□□□□□ -0.46
Nup88-201ENSMUST00000035283 Rhox3gB9EJQ9 160 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Pcsk4P29121 655 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Rps4xP62702 263 aaKnown RBP12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Serpinf1P97298 417 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Glycam1Q02596 151 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr205Q7TS37 305 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Jazf1Q80ZQ5 243 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Spryd4Q91WK1 207 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Dusp22Q99N11 184 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Cops7aQ9CZ04 275 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Dmrt1Q9QZ59 374 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Adam18Q9R157 719 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Cacna1eQ61290 2272 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 4932443I19RikA0A286YE38 169 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Gm16434J3QN10 205 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr889L7N1Y6 314 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Galr3O88853 370 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ptx3P48759 381 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 PkiaP63248 76 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Epha6Q62413 1035 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Slc35f2Q7TML3 375 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1500Q7TQQ3 311 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Q80UB0 333 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Serinc5Q8BHJ6 461 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Psmf1Q8BHL8 271 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Pqlc2Q8C4N4 293 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tceal5Q8CCT4 200 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 BlvrbQ923D2 206 aaKnown RBP12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Q99K99 313 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Hrasls5Q9CPX5 270 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Sgo1Q9CXH7 517 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Lrrc51Q9DAK8 192 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ap1s2Q9DB50 160 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 FastkQ9JIX9 511 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Cryba2Q9JJV1 197 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 LipgQ9WVG5 500 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Lrrk1Q3UHC2 2014 aa12.19□□□□□ -0.46
Nup88-201ENSMUST00000035283 Sirpb1bA0A0A6YXN8 397 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Atxn7l3A2AWT3 347 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Zfp599E9PWP1 548 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Vmn2r80E9Q1L0 863 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1348F6VB59 318 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Sirpb1cK7N6K7 397 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tspan6O70401 245 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 MosP00536 390 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Il5raP21183 415 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Nrsn1P97799 196 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ankrd34cQ8BLB8 534 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 PigmQ8C2R7 423 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 CenpxQ8C4X1 78 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Srpx2Q8R054 468 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 GcaQ8VC88 220 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1094Q8VF13 330 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ethe1Q9DCM0 254 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 PbkQ9JJ78 330 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Chst11Q9JME2 352 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Sema7aQ9QUR8 664 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Gm21497A0A087WRK3 222 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Actl10A2AKE7 346 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Usp36B1AQJ2 1098 aaKnown RBP12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Saxo1B1AXP3 476 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Rad51dO55230 329 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Nfkbil1O88995 381 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Il5P04401 133 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Lemd1Q14C37 129 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tmem231Q3U284 315 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 LipnQ3U4B4 400 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Mettl7a2Q5I0W6 244 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Shc4Q6S5L9 626 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Kiaa0895Q7TQE7 519 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1061Q7TR72 313 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Slc30a6Q8BJM5 460 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 C1saQ8CG14 688 aa12.18□□□□□ -0.46
Nup88-201ENSMUST00000035283 Katnal1Q8K0T4 488 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms