Protein–RNA interactions for Protein: Q640P7

Tbccd1, TBCC domain-containing protein 1, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbccd1Q640P7 Gm25239-201ENSMUST00000174915 86 ntBASIC37.93■■■■□ 3.66
Tbccd1Q640P7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Tbccd1Q640P7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Tbccd1Q640P7 Gm15042-201ENSMUST00000120212 883 ntBASIC33.24■■■□□ 2.91
Tbccd1Q640P7 Gm24109-201ENSMUST00000175489 103 ntBASIC32.83■■■□□ 2.85
Tbccd1Q640P7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Tbccd1Q640P7 Gm15045-201ENSMUST00000117359 883 ntBASIC32.49■■■□□ 2.79
Tbccd1Q640P7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Tbccd1Q640P7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Tbccd1Q640P7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Tbccd1Q640P7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Tbccd1Q640P7 Gm23366-201ENSMUST00000175022 89 ntBASIC31.74■■■□□ 2.67
Tbccd1Q640P7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Tbccd1Q640P7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Tbccd1Q640P7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tbccd1Q640P7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tbccd1Q640P7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.78■■■□□ 2.52
Tbccd1Q640P7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Tbccd1Q640P7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Tbccd1Q640P7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.55■■■□□ 2.48
Tbccd1Q640P7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Tbccd1Q640P7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Tbccd1Q640P7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Tbccd1Q640P7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.35■■■□□ 2.45
Tbccd1Q640P7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
Tbccd1Q640P7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.26■■■□□ 2.43
Tbccd1Q640P7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Tbccd1Q640P7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.19■■■□□ 2.42
Tbccd1Q640P7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Tbccd1Q640P7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Tbccd1Q640P7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Tbccd1Q640P7 Psd-208ENSMUST00000224556 2034 ntBASIC30.03■■■□□ 2.4
Tbccd1Q640P7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Tbccd1Q640P7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.96■■■□□ 2.39
Tbccd1Q640P7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Tbccd1Q640P7 Gm25238-201ENSMUST00000174914 89 ntBASIC29.9■■■□□ 2.38
Tbccd1Q640P7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tbccd1Q640P7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.65■■■□□ 2.34
Tbccd1Q640P7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
Tbccd1Q640P7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Tbccd1Q640P7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Tbccd1Q640P7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Tbccd1Q640P7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.27■■■□□ 2.28
Tbccd1Q640P7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Tbccd1Q640P7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.15■■■□□ 2.26
Tbccd1Q640P7 Gm27325-201ENSMUST00000175467 74 ntBASIC29.15■■■□□ 2.26
Tbccd1Q640P7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.12■■■□□ 2.25
Tbccd1Q640P7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Tbccd1Q640P7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Tbccd1Q640P7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
Tbccd1Q640P7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.93■■■□□ 2.22
Tbccd1Q640P7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Tbccd1Q640P7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tbccd1Q640P7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.77■■■□□ 2.2
Tbccd1Q640P7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.74■■■□□ 2.19
Tbccd1Q640P7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tbccd1Q640P7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tbccd1Q640P7 Gm25262-201ENSMUST00000174934 133 ntBASIC28.67■■■□□ 2.18
Tbccd1Q640P7 Rab21-202ENSMUST00000218831 843 ntBASIC28.6■■■□□ 2.17
Tbccd1Q640P7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Tbccd1Q640P7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tbccd1Q640P7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Tbccd1Q640P7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
Tbccd1Q640P7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.49■■■□□ 2.15
Tbccd1Q640P7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Tbccd1Q640P7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Tbccd1Q640P7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tbccd1Q640P7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Tbccd1Q640P7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tbccd1Q640P7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tbccd1Q640P7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Tbccd1Q640P7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.33■■■□□ 2.13
Tbccd1Q640P7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.28■■■□□ 2.12
Tbccd1Q640P7 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.27■■■□□ 2.12
Tbccd1Q640P7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Tbccd1Q640P7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Tbccd1Q640P7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tbccd1Q640P7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tbccd1Q640P7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tbccd1Q640P7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Tbccd1Q640P7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.1■■■□□ 2.09
Tbccd1Q640P7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tbccd1Q640P7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.07■■■□□ 2.08
Tbccd1Q640P7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tbccd1Q640P7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Tbccd1Q640P7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.98■■■□□ 2.07
Tbccd1Q640P7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.96■■■□□ 2.07
Tbccd1Q640P7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Tbccd1Q640P7 Gm26115-201ENSMUST00000175605 87 ntBASIC27.93■■■□□ 2.06
Tbccd1Q640P7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tbccd1Q640P7 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.89■■■□□ 2.06
Tbccd1Q640P7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Tbccd1Q640P7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Tbccd1Q640P7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tbccd1Q640P7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tbccd1Q640P7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Tbccd1Q640P7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Tbccd1Q640P7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.82■■■□□ 2.04
Tbccd1Q640P7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.78■■■□□ 2.04
Tbccd1Q640P7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms