Protein–RNA interactions for Protein: Q63959

Kcnc3, Potassium voltage-gated channel subfamily C member 3, mousemouse

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnc3Q63959 Gm25239-201ENSMUST00000174915 86 ntBASIC35,88■■■■□ 3,33
Kcnc3Q63959 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33,49■■■□□ 2,95
Kcnc3Q63959 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,88■■■□□ 2,85
Kcnc3Q63959 Gm24109-201ENSMUST00000175489 103 ntBASIC31,46■■■□□ 2,63
Kcnc3Q63959 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Kcnc3Q63959 Gm15042-201ENSMUST00000120212 883 ntBASIC30,71■■■□□ 2,51
Kcnc3Q63959 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30,29■■■□□ 2,44
Kcnc3Q63959 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30,25■■■□□ 2,43
Kcnc3Q63959 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Kcnc3Q63959 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Kcnc3Q63959 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,38
Kcnc3Q63959 Gm15045-201ENSMUST00000117359 883 ntBASIC29,93■■■□□ 2,38
Kcnc3Q63959 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29,82■■■□□ 2,37
Kcnc3Q63959 Gm23366-201ENSMUST00000175022 89 ntBASIC29,81■■■□□ 2,36
Kcnc3Q63959 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29,57■■■□□ 2,32
Kcnc3Q63959 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29,26■■■□□ 2,27
Kcnc3Q63959 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29,23■■■□□ 2,27
Kcnc3Q63959 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Kcnc3Q63959 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29,19■■■□□ 2,26
Kcnc3Q63959 Psd-208ENSMUST00000224556 2034 ntBASIC28,79■■■□□ 2,2
Kcnc3Q63959 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Kcnc3Q63959 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Kcnc3Q63959 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Kcnc3Q63959 Gm25238-201ENSMUST00000174914 89 ntBASIC28,54■■■□□ 2,16
Kcnc3Q63959 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28,51■■■□□ 2,15
Kcnc3Q63959 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28,44■■■□□ 2,14
Kcnc3Q63959 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,44■■■□□ 2,14
Kcnc3Q63959 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,16■■■□□ 2,1
Kcnc3Q63959 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,02■■■□□ 2,08
Kcnc3Q63959 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,98■■■□□ 2,07
Kcnc3Q63959 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,92■■■□□ 2,06
Kcnc3Q63959 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,86■■■□□ 2,05
Kcnc3Q63959 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,85■■■□□ 2,05
Kcnc3Q63959 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,83■■■□□ 2,05
Kcnc3Q63959 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,8■■■□□ 2,04
Kcnc3Q63959 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,7■■■□□ 2,03
Kcnc3Q63959 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,66■■■□□ 2,02
Kcnc3Q63959 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27,63■■■□□ 2,01
Kcnc3Q63959 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,62■■■□□ 2,01
Kcnc3Q63959 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,62■■■□□ 2,01
Kcnc3Q63959 Gm25262-201ENSMUST00000174934 133 ntBASIC27,59■■■□□ 2,01
Kcnc3Q63959 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,58■■■□□ 2
Kcnc3Q63959 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,55■■■□□ 2
Kcnc3Q63959 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■■□□ 2
Kcnc3Q63959 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,42■■□□□ 1,98
Kcnc3Q63959 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27,37■■□□□ 1,97
Kcnc3Q63959 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27,35■■□□□ 1,97
Kcnc3Q63959 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,35■■□□□ 1,97
Kcnc3Q63959 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27,32■■□□□ 1,96
Kcnc3Q63959 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27,2■■□□□ 1,94
Kcnc3Q63959 Gm26115-201ENSMUST00000175605 87 ntBASIC27,16■■□□□ 1,94
Kcnc3Q63959 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27,14■■□□□ 1,93
Kcnc3Q63959 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27,12■■□□□ 1,93
Kcnc3Q63959 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,11■■□□□ 1,93
Kcnc3Q63959 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27,09■■□□□ 1,93
Kcnc3Q63959 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,07■■□□□ 1,92
Kcnc3Q63959 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,02■■□□□ 1,92
Kcnc3Q63959 Gm8109-201ENSMUST00000194076 746 ntBASIC27■■□□□ 1,91
Kcnc3Q63959 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,91
Kcnc3Q63959 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26,91■■□□□ 1,9
Kcnc3Q63959 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,88■■□□□ 1,89
Kcnc3Q63959 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,82■■□□□ 1,88
Kcnc3Q63959 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,81■■□□□ 1,88
Kcnc3Q63959 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26,81■■□□□ 1,88
Kcnc3Q63959 Gm27325-201ENSMUST00000175467 74 ntBASIC26,77■■□□□ 1,88
Kcnc3Q63959 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,7■■□□□ 1,86
Kcnc3Q63959 Rab21-202ENSMUST00000218831 843 ntBASIC26,68■■□□□ 1,86
Kcnc3Q63959 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26,65■■□□□ 1,86
Kcnc3Q63959 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,65■■□□□ 1,86
Kcnc3Q63959 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Kcnc3Q63959 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,6■■□□□ 1,85
Kcnc3Q63959 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,59■■□□□ 1,85
Kcnc3Q63959 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
Kcnc3Q63959 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,46■■□□□ 1,83
Kcnc3Q63959 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,41■■□□□ 1,82
Kcnc3Q63959 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,41■■□□□ 1,82
Kcnc3Q63959 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26,38■■□□□ 1,81
Kcnc3Q63959 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,36■■□□□ 1,81
Kcnc3Q63959 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,35■■□□□ 1,81
Kcnc3Q63959 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,34■■□□□ 1,81
Kcnc3Q63959 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,8
Kcnc3Q63959 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,32■■□□□ 1,8
Kcnc3Q63959 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26,28■■□□□ 1,8
Kcnc3Q63959 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,28■■□□□ 1,8
Kcnc3Q63959 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,28■■□□□ 1,8
Kcnc3Q63959 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,22■■□□□ 1,79
Kcnc3Q63959 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,78
Kcnc3Q63959 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,18■■□□□ 1,78
Kcnc3Q63959 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Kcnc3Q63959 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
Kcnc3Q63959 Gm24804-201ENSMUST00000174982 85 ntBASIC26,01■■□□□ 1,75
Kcnc3Q63959 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Kcnc3Q63959 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,97■■□□□ 1,75
Kcnc3Q63959 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Kcnc3Q63959 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,95■■□□□ 1,74
Kcnc3Q63959 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,74
Kcnc3Q63959 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25,92■■□□□ 1,74
Kcnc3Q63959 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,92■■□□□ 1,74
Kcnc3Q63959 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25,9■■□□□ 1,74
Kcnc3Q63959 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Retrieved 100 of 76,532 protein–RNA pairs in 10,2 ms