RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 PPP1R3BQ86XI6 285 aa12.13□□□□□ -0.47
PCDHA11-202ENST00000616325 OR1E3Q8WZA6 343 aa12.13□□□□□ -0.47
PCDHA11-202ENST00000616325 SLC25A36Q96CQ1 311 aa12.13□□□□□ -0.47
PCDHA11-202ENST00000616325 FN3KRPQ9HA64 309 aa12.13□□□□□ -0.47
PCDHA11-202ENST00000616325 FRRS1LQ9P0K9 344 aa12.13□□□□□ -0.47
PCDHA11-202ENST00000616325 CDC14CA4D256 554 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 C5orf52A6NGY3 159 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ZNF749O43361 778 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 NDUFB2O95178 105 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 SLC2A5P22732 501 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 PJVKQ0ZLH3 352 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ECH1Q13011 328 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 FIP1L1Q6UN15 594 aaKnown RBP12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 SYS1Q8N2H4 156 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ST7LQ8TDW4 575 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ALG12Q9BV10 488 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 SEC11CQ9BY50 192 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 COMMD4Q9H0A8 199 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 LAMP5Q9UJQ1 280 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 PRSS38A1L453 326 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 RHPN2P1A8MT19 583 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 LRP3O75074 770 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 TAS2R19P59542 299 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 GPR18Q14330 331 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 SLC9A3R2Q15599 337 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ZNHIT3Q15649 155 aaPredicted RBP12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 USF2Q15853 346 aaPredicted RBP12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 RNF212Q495C1 297 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 CDRT4Q8N9R6 151 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 HIST1H2BAQ96A08 127 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 OR2M4Q96R27 311 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 RPP25Q9BUL9 199 aaKnown RBP12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 RAB11FIP5Q9BXF6 653 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 PRO1933Q9H354 126 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 RGCCQ9H4X1 137 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 HRASLS2Q9NWW9 162 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 IFNA6P05013 189 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ERCC1P07992 297 aaPredicted RBP12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ITGA5P08648 1049 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 TACSTD2P09758 323 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 SERPINF1P36955 418 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 MAP3K8P41279 467 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 NDUFA6P56556 154 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ENPP2Q13822 863 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 SLC22A6Q4U2R8 563 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 ZNF561Q8N587 486 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 GVQW1Q8N7I0 195 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 AKR7LQ8NHP1 331 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 PHB2Q99623 299 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 TEX101Q9BY14 249 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 EIF5A2Q9GZV4 153 aaKnown RBP12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 MRPS33Q9Y291 106 aaKnown RBP12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 KLHDC2Q9Y2U9 406 aa12.12□□□□□ -0.47
PCDHA11-202ENST00000616325 CDC40O60508 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 WNT11O96014 354 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 DIO1P49895 249 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RPS15AP62244 130 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RAB11BQ15907 218 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RNASE10Q5GAN6 216 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 DMRTC1Q5HYR2 192 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RPL13AP3Q6NVV1 102 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 ZNF584Q8IVC4 421 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 MAFIPQ8WZ33 124 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RP1P56715 2156 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 DCTN6O00399 190 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 AGR2O95994 175 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 PSMB6P28072 239 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 EIF2S3P41091 472 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 CTXN1P60606 82 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 ACTBP60709 375 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 ACTG1P63261 375 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 GLYATL3Q5SZD4 288 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 CDPF1Q6NVV7 123 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 GALNTL5Q7Z4T8 443 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RNF113BQ8IZP6 322 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 CLEC1AQ8NC01 280 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 OR10H5Q8NGA6 315 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 CMBLQ96DG6 245 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 PIK3IP1Q96FE7 263 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RCC2Q9P258 522 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 CELSR3Q9NYQ7 3312 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 A0A087WV62 115 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 PMS2P1A4D2B8 440 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 GATCO43716 136 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 RUNX3Q13761 415 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 C21orf62-AS1Q17RA5 79 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 ANKRD16Q6P6B7 361 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 UNQ9370/PRO34162Q6UXP9 181 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 POMGNT2Q8NAT1 580 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 BHLHE23Q8NDY6 225 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 PHYHIPLQ96FC7 376 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 GAL3ST4Q96RP7 486 aa12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 UTP23Q9BRU9 249 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 METTL8Q9H825 291 aaKnown RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 C19orf53Q9UNZ5 99 aaPredicted RBP12.11□□□□□ -0.47
PCDHA11-202ENST00000616325 SLC22A13Q9Y226 551 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms