RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 SELENOVP59797 346 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 CTXN1P60606 82 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 RAP1BP61224 184 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 LMO4P61968 165 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 RAP1AP62834 184 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 THEM4Q5T1C6 240 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 FAM122BQ7Z309 247 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.18■□□□□ 0.18
CDX1-202ENST00000616154 SEMA6DQ8NFY4 1073 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 OR51A7Q8NH64 312 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 ZFAND2BQ8WV99 257 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 GPX7Q96SL4 187 aaPredicted RBP16.18■□□□□ 0.18
CDX1-202ENST00000616154 LPAR2Q9HBW0 351 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 HINT3Q9NQE9 182 aaKnown RBP16.18■□□□□ 0.18
CDX1-202ENST00000616154 VNN3Q9NY84 501 aa16.18■□□□□ 0.18
CDX1-202ENST00000616154 FAM32AQ9Y421 112 aaKnown RBP16.18■□□□□ 0.18
CDX1-202ENST00000616154 WNK2Q9Y3S1 2297 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 AHCYL1O43865 530 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 PTP4A3O75365 173 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 VENTXO95231 258 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 CLPTM1O96005 669 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 CST1P01037 141 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 PTHP01270 115 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 CD14P08571 375 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 CCL2P13500 99 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 GPR4P46093 362 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 OMPP47874 163 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 KLF3P57682 345 aaPredicted RBP16.17■□□□□ 0.18
CDX1-202ENST00000616154 MYBPC1Q00872 1141 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 FMODQ06828 376 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 SCGB2A2Q13296 93 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 TBC1D28Q2M2D7 210 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 PCGF3Q3KNV8 242 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 ALKBH6Q3KRA9 238 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 ZBED5Q49AG3 693 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 FAM27BQ5VT28 67 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 SLC16A14Q7RTX9 510 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 PQLC1Q8N2U9 271 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 OR4C15Q8NGM1 316 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 OR1J2Q8NGS2 313 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 SYNPRQ8TBG9 265 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 SNX33Q8WV41 574 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 LRTOMTQ8WZ04 291 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 PKP2Q99959 881 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 OCEL1Q9H607 264 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 RNF121Q9H920 327 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 SLCO1C1Q9NYB5 712 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 NKIRAS2Q9NYR9 191 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 SIGLEC7Q9Y286 467 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 LYVE1Q9Y5Y7 322 aa16.17■□□□□ 0.18
CDX1-202ENST00000616154 TRAV20A0A0B4J274 112 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 LCKP06239 509 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 SMIM11AP58511 58 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 CD47Q08722 323 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 TOP3AQ13472 1001 aaPredicted RBP16.16■□□□□ 0.18
CDX1-202ENST00000616154 RCN1Q15293 331 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 TMEM154Q6P9G4 183 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 IGFN1Q86VF2 1251 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 C11orf40Q8WZ69 217 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 CENPNQ96H22 339 aaPredicted RBP16.16■□□□□ 0.18
CDX1-202ENST00000616154 RBP7Q96R05 134 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 BCL2L14Q9BZR8 327 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 OR51B6Q9H340 312 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 RNPEPL1Q9HAU8 725 aa16.16■□□□□ 0.18
CDX1-202ENST00000616154 TRBV4-1A0A0J9YWV2 114 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 IQCMA0A1B0GVH7 501 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 ANPEPP15144 967 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 RRM2P31350 389 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 RAD52P43351 418 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 UCP2P55851 309 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 ERVS71-1P61550 626 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 PLP2Q04941 152 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 SEC23BQ15437 767 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 SHQ1Q6PI26 577 aaKnown RBP16.15■□□□□ 0.18
CDX1-202ENST00000616154 RRM2BQ7LG56 351 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 NDEL1Q9GZM8 345 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 NRIP3Q9NQ35 241 aa16.15■□□□□ 0.18
CDX1-202ENST00000616154 DYSFO75923 2080 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 CDC14BO60729 498 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 GADD45GO95257 159 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 PNPP00491 289 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 CDAP32320 146 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 CRYBB2P43320 205 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 FXYD6P3P58550 94 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 CCL8P80075 99 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 SPIBQ01892 262 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 TEKQ02763 1124 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 FGD3Q5JSP0 725 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 C12orf54Q6X4T0 127 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 TEX29Q8N6K0 151 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 CLDN22Q8N7P3 220 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 NRBF2Q96F24 287 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 FAM46AQ96IP4 442 aaKnown RBP16.14■□□□□ 0.17
CDX1-202ENST00000616154 WACQ9BTA9 647 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 ZNF665Q9H7R5 613 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 REEP1Q9H902 201 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 G6PC2Q9NQR9 355 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 ADAM18Q9Y3Q7 739 aa16.14■□□□□ 0.17
CDX1-202ENST00000616154 ICMTO60725 284 aa16.13■□□□□ 0.17
CDX1-202ENST00000616154 NDUFB2O95178 105 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms