RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 OR5H1A6NKK0 313 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 ZNF99A8MXY4 864 aaPredicted RBP13.67□□□□□ -0.22
CPSF3-203ENST00000475482 MYL12BO14950 172 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 MRPL33O75394 65 aaKnown RBP13.67□□□□□ -0.22
CPSF3-203ENST00000475482 IGHG1P01857 330 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 PCMT1P22061 227 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 C21orf33P30042 268 aaPredicted RBP13.67□□□□□ -0.22
CPSF3-203ENST00000475482 BIDP55957 195 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 GGTLC2Q14390 218 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 Q5PR19 223 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 KDM8Q8N371 416 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 PROKR2Q8NFJ6 384 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 OR51G2Q8NGK0 314 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 OR9Q1Q8NGQ5 310 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 OR6X1Q8NH79 312 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 SGCDQ92629 289 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 AKAP1Q92667 903 aaKnown RBP eCLIP13.67□□□□□ -0.22
CPSF3-203ENST00000475482 RBP7Q96R05 134 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 CNN2Q99439 309 aaKnown RBP13.67□□□□□ -0.22
CPSF3-203ENST00000475482 JAM3Q9BX67 310 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 HCAR1Q9BXC0 346 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 ESRP2Q9H6T0 727 aaKnown RBP13.67□□□□□ -0.22
CPSF3-203ENST00000475482 B3GAT1Q9P2W7 334 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 RNF115Q9Y4L5 304 aa13.67□□□□□ -0.22
CPSF3-203ENST00000475482 NSD1Q96L73 2696 aaPredicted RBP13.67□□□□□ -0.22
CPSF3-203ENST00000475482 DPPA5A6NC42 116 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 CCDC182A6NF36 153 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 IGHV3-9P01782 118 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 CD3EP07766 207 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 ITGA5P08648 1049 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 DANCRP0C864 163 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 HLA-DOBP13765 273 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 GSTT1P30711 240 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 CAPZA2P47755 286 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 FOXG1P55316 489 aaPredicted RBP13.66□□□□□ -0.22
CPSF3-203ENST00000475482 CLRN1P58418 232 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 IRF3Q14653 427 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 MELKQ14680 651 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 PPA1Q15181 289 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 UBE2UQ5VVX9 321 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 XAF1Q6GPH4 301 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 ZNF367Q7RTV3 350 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 ACBD7Q8N6N7 88 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 OR6K6Q8NGW6 343 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 MUL1Q969V5 352 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 SLC25A44Q96H78 314 aaPredicted RBP13.66□□□□□ -0.22
CPSF3-203ENST00000475482 BOD1Q96IK1 185 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 C18orf12Q96KH6 178 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 MNTQ99583 582 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 SYT4Q9H2B2 425 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 PARPBPQ9NWS1 579 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 ASB6Q9NWX5 421 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 TAS2R16Q9NYV7 291 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 NPAP1Q9NZP6 1156 aa13.66□□□□□ -0.22
CPSF3-203ENST00000475482 ZANQ9Y493 2812 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 SLC22A23A1A5C7 686 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 OVOL3O00110 214 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 TRAF3IP2O43734 574 aaPredicted RBP13.65□□□□□ -0.22
CPSF3-203ENST00000475482 TRMUO75648 421 aaKnown RBP13.65□□□□□ -0.22
CPSF3-203ENST00000475482 IGHA1P01876 353 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 GYPBP06028 91 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 SBK2P0C263 348 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 OR2T7P0C7T2 308 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 PTH2RP49190 550 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 BSPH1Q075Z2 132 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 GABRA6Q16445 453 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 THEM4Q5T1C6 240 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 SYT6Q5T7P8 510 aaPredicted RBP13.65□□□□□ -0.22
CPSF3-203ENST00000475482 TMPRSS11AQ6ZMR5 421 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 ZBTB46Q86UZ6 589 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 SATL1Q86VE3 508 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 OR9K2Q8NGE7 335 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 OR2T27Q8NH04 317 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 MUCL1Q96DR8 90 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 KCNK17Q96T54 332 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 GSX1Q9H4S2 264 aaPredicted RBP13.65□□□□□ -0.22
CPSF3-203ENST00000475482 SRA1Q9HD15 236 aaKnown RBP13.65□□□□□ -0.22
CPSF3-203ENST00000475482 SLC7A10Q9NS82 523 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 MED29Q9NX70 200 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 SLC25A15Q9Y619 301 aa13.65□□□□□ -0.22
CPSF3-203ENST00000475482 TMEM129A0AVI4 362 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 DAPL1A0PJW8 107 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 SLC35F4A4IF30 521 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 SHISA9B4DS77 424 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 SLC16A7O60669 478 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 NOL3O60936 208 aaKnown RBP13.64□□□□□ -0.23
CPSF3-203ENST00000475482 CLUP10909 449 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 PSMB9P28065 219 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 MAP2K4P45985 399 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 HSF2Q03933 536 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 GLO1Q04760 184 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 FAPQ12884 760 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 RAB39AQ14964 217 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 STK11Q15831 433 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 ZNF672Q499Z4 452 aaPredicted RBP13.64□□□□□ -0.23
CPSF3-203ENST00000475482 C1QTNF12Q5T7M4 302 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 TSPO2Q5TGU0 170 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 OR7E24Q6IFN5 339 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 ALKBH2Q6NS38 261 aa13.64□□□□□ -0.23
CPSF3-203ENST00000475482 CREB3L2Q70SY1 520 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms