RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 ZNF775Q96BV0 537 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 LINC00597Q9H2U6 94 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 C3P01024 1663 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 LOC107986453A0A1B0GWG9 222 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 CTSLP07711 333 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 GDF1P27539 372 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 BAMBIQ13145 260 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF66Q6ZN08 573 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 H2BFWTQ7Z2G1 175 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 PGBD5Q8N414 524 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 OR4C16Q8NGL9 310 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 OR5M1Q8NGP8 315 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 MARCH1Q8TCQ1 289 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 SMIM4Q8WVI0 70 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 CCDC74AQ96AQ1 378 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 CASD1Q96PB1 797 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 TECTBQ96PL2 329 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 ARHGAP9Q9BRR9 750 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 MMP24Q9Y5R2 645 aa12.29□□□□□ -0.44
CCDC144A-203ENST00000360495 EMG1Q92979 244 aaKnown RBP12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 PISDQ9UG56 409 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 NTNG1Q9Y2I2 539 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 CAMTA1Q9Y6Y1 1673 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 H0YGG7 62 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 LRP3O75074 770 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF750Q32MQ0 723 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 C11orf87Q6NUJ2 197 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEM207Q6UWW9 146 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF429Q86V71 674 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 OR6S1Q8NH40 331 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 NUDCD2Q8WVJ2 157 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 MMP26Q9NRE1 261 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 SLC25A37Q9NYZ2 338 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 MRPL33O75394 65 aaKnown RBP12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 HRH1P35367 487 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 SMUG1Q53HV7 270 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF626Q68DY1 528 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 MFSD12Q6NUT3 480 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 KLF16Q9BXK1 252 aaPredicted RBP12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 CMC2Q9NRP2 79 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 CYB5R1Q9UHQ9 305 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 TCAPO15273 167 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 PMCHP20382 165 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 CD300CQ08708 224 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 GUK1Q16774 197 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 RPL7L1Q6DKI1 246 aaKnown RBP12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 GLDNQ6ZMI3 551 aaPredicted RBP12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF595Q8IYB9 648 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 OR10J5Q8NHC4 309 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 TIMM29Q9BSF4 260 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 C11orf49Q9H6J7 331 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 RAB18Q9NP72 206 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 KLK11Q9UBX7 282 aa12.28□□□□□ -0.44
CCDC144A-203ENST00000360495 KIR2DS1A0A191URI9 304 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 AQP7P3A6NL99 342 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF195O14628 629 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 ENSAO43768 121 aaKnown RBP12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 EDN1P05305 212 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 KIR2DS4P43632 304 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 TPBGQ13641 420 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 KIR2DS1Q14954 304 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 TOMM34Q15785 309 aaPredicted RBP12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 PRSS36Q5K4E3 855 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEM268Q5VZI3 342 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 INSM2Q96T92 566 aaPredicted RBP12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF891A8MT65 544 aaPredicted RBP12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 HSBP1O75506 76 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 MMP15P51511 669 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 FAM24BQ8N5W8 94 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 COA3Q9Y2R0 106 aaPredicted RBP12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 NUMBLQ9Y6R0 609 aa12.27□□□□□ -0.44
CCDC144A-203ENST00000360495 UBR1Q8IWV7 1749 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 SIGLEC6O43699 453 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 NXPH2O95156 264 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 UTS2O95399 124 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 HLXQ14774 488 aaPredicted RBP12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 OR2W3Q7Z3T1 314 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC16A11Q8NCK7 471 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 TMEM37Q8WXS4 190 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 SMIM19Q96E16 107 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 GINS3Q9BRX5 216 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 TRAF4Q9BUZ4 470 aaPredicted RBP12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 PBX4Q9BYU1 374 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 CROCCQ5TZA2 2017 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 GPNMBQ14956 572 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 PCK2Q16822 640 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 TMEM183BQ1AE95 376 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 ACOT6Q3I5F7 207 aaPredicted RBP12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 PKDCCQ504Y2 493 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 FAHD1Q6P587 224 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 AAED1Q7RTV5 226 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC38A6Q8IZM9 456 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 ANKLE1Q8NAG6 615 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 GPR173Q9NS66 373 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 TRAPPC1Q9Y5R8 145 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 CCDC187A0A096LP49 1063 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms