RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MESP1Q9BRJ9 268 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 RTL8AQ9BWD3 113 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 COMMD9Q9P000 198 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 RALYQ9UKM9 306 aaKnown RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF175Q9Y473 711 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 A0A1W2PPH5 198 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 TOR1AO14656 332 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF32P17041 273 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 MAP2K4P45985 399 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 ATP5J2P56134 94 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 DMRTC1Q5HYR2 192 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 PABPC1L2AQ5JQF8 200 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 AP1ARQ63HQ0 302 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 PIP4P1Q86T03 277 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 C17orf82Q86X59 251 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 MOV10Q9HCE1 1003 aaKnown RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 REV1Q9UBZ9 1251 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 PIGLQ9Y2B2 252 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 A0A1W2PQD3 144 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 FUOMA2VDF0 154 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 FAM172BPA6NC97 362 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 NOS1APO75052 506 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 GLCEO94923 617 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 CNOT4O95628 575 aaKnown RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 CRYBA1P05813 215 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 CELA3AP09093 270 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 PRKACBP22694 351 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 SOX18P35713 384 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 TGM4P49221 684 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 SELENOPP49908 381 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 RORCP51449 518 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 KLF3P57682 345 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 RAB11BQ15907 218 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 HYAL4Q2M3T9 481 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 FBXW9Q5XUX1 488 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 C22orf42Q6IC83 251 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 CLEC2AQ6UVW9 174 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 DTX3Q8N9I9 347 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 APCDD1LQ8NCL9 501 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 CHDHQ8NE62 594 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-229ENST00000622668 NOXO1Q8NFA2 376 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 TXNDC15Q96J42 360 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 SLC29A1Q99808 456 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 CES1P1Q9UKY3 287 aa8.13□□□□□ -1.11
HDAC9-229ENST00000622668 A0A0B4J2E0 115 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 FAM240BA0A1B0GVZ2 78 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 A0A1B0GX12 115 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 OR6C6A6NF89 314 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 SSNA1O43805 119 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 DIRAS3O95661 229 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 PRF1P14222 555 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 GGTLC2Q14390 218 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 TAB1Q15750 504 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 HIKESHIQ53FT3 197 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 OR2T2Q6IF00 324 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 COX15Q7KZN9 410 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 BCDIN3DQ7Z5W3 292 aaKnown RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 IQCF2Q8IXL9 164 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 FAM185AQ8N0U4 392 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 C17orf47Q8NEP4 570 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 RAB1CQ92928 201 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 ENY2Q9NPA8 101 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 ZFC3H1O60293 1989 aaKnown RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 ENSAO43768 121 aaKnown RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 AHCYL1O43865 530 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 GLRA1P23415 457 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 AP3S2P59780 193 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF91Q05481 1191 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 E2F2Q14209 437 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 C6orf89Q6UWU4 347 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF620Q6ZNG0 422 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 CLDN22Q8N7P3 220 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 SAMD12Q8N8I0 201 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 SEMA6DQ8NFY4 1073 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 WNT2BQ93097 391 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 ELMOD3Q96FG2 381 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 IMMP1LQ96LU5 166 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 TMEM43Q9BTV4 400 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 RSL24D1Q9UHA3 163 aaKnown RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 FBXL3Q9UKT7 428 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 TRAPPC2LQ9UL33 140 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 SPATA2Q9UM82 520 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 AK6Q9Y3D8 172 aaKnown RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 PCDHGA9Q9Y5G4 932 aaKnown RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 FABP12A6NFH5 140 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 FXYD1O00168 92 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 CBFA2T3O75081 653 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 RFPL3SP0C7P2 107 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 OR2T7P0C7T2 308 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 BMP2P12643 396 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 VAMP1P23763 118 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 MPGP29372 298 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 SRP9P49458 86 aaKnown RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 SMCO1Q147U7 214 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 HES5Q5TA89 166 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 OR2T27Q8NH04 317 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 SLC5A7Q9GZV3 580 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 ENAMQ9NRM1 1142 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 TMEM100Q9NV29 134 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 TAAR3PQ9P1P4 343 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms