RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 POLE4Q9NR33 117 aa13.21□□□□□ -0.3
GTF2F1-202ENST00000593678 CCDC59Q9P031 241 aaKnown RBP13.21□□□□□ -0.3
GTF2F1-202ENST00000593678 GTF2A1LQ9UNN4 478 aa13.21□□□□□ -0.3
GTF2F1-202ENST00000593678 CACNA1CQ13936 2221 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF724A8MTY0 619 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 PRR32B1ATL7 298 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 LRRTM2O43300 516 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 NPR2P20594 1047 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF133P52736 654 aaPredicted RBP13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 LSM6P62312 80 aaKnown RBP13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 ALKBH1Q13686 389 aaKnown RBP13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 TAF13Q15543 124 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 KCNMB1Q16558 191 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 OR7E24Q6IFN5 339 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 DEGS2Q6QHC5 323 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 KLHL24Q6TFL4 600 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 OR5AK2Q8NH90 309 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 TRMT61AQ96FX7 289 aaKnown RBP13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 ABHD17AQ96GS6 310 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 PGLYRP3Q96LB9 341 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 AMELYQ99218 206 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 CALHM2Q9HA72 323 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 CRLF2Q9HC73 371 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 CENPMQ9NSP4 180 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 CYB5R1Q9UHQ9 305 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF175Q9Y473 711 aa13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 ANKRD11Q6UB99 2663 aaPredicted RBP13.2□□□□□ -0.3
GTF2F1-202ENST00000593678 A0A1B0GVC2 190 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 CASKO14936 926 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 CDRT1O95170 752 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ABHD16AO95870 558 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 IL1AP01583 271 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 YES1P07947 543 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ADRB1P08588 477 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 PSKH1P11801 424 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 MYL9P24844 172 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 RORCP51449 518 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 TBR1Q16650 682 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 YIF1BQ5BJH7 314 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 RIPPLY2Q5TAB7 128 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 RPUSD3Q6P087 351 aaKnown RBP13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 CORO6Q6QEF8 472 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 CEACAM19Q7Z692 300 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 TUSC5Q8IXB3 177 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 MCFD2Q8NI22 146 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ABHD4Q8TB40 342 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 SLAMF6Q96DU3 332 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ALKBH3Q96Q83 286 aaPredicted RBP13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 PRDM14Q9GZV8 571 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 SLCO5A1Q9H2Y9 848 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 RNF122Q9H9V4 155 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 BCO1Q9HAY6 547 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 SNTG1Q9NSN8 517 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ASH2LQ9UBL3 628 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 GDF2Q9UK05 429 aaPredicted RBP13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 RAXQ9Y2V3 346 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF281Q9Y2X9 895 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 LRP12Q9Y561 859 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 TMEM212A6NML5 194 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 UPK3AO75631 287 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 HSD11B1P28845 292 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF829Q3KNS6 432 aaPredicted RBP13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF404Q494X3 552 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ACSM3Q53FZ2 586 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 PHYHD1Q5SRE7 291 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF100Q8IYN0 542 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF676Q8N7Q3 588 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 RBMXL3Q8N7X1 1067 aaKnown RBP13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 CPT1CQ8TCG5 803 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 ST7LQ8TDW4 575 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 RNF133Q8WVZ7 376 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 EXTL1Q92935 676 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 APH1AQ96BI3 265 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 PDCD1LG2Q9BQ51 273 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 C6orf62Q9GZU0 229 aaPredicted RBP13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 TPK1Q9H3S4 243 aa13.19□□□□□ -0.3
GTF2F1-202ENST00000593678 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 ZNF878C9JN71 531 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 GATBO75879 557 aaKnown RBP13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 ARL6IP5O75915 188 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 PDGFAP04085 211 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 MAPK3P27361 379 aaPredicted RBP13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 CALRP27797 417 aaKnown RBP13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 MRPS34P82930 218 aaKnown RBP13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 MXD1Q05195 221 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 SF3B4Q15427 424 aaKnown RBP eCLIP13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 FAM180AQ6UWF9 173 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 OR2G2Q8NGZ5 317 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 TAAR6Q96RI8 345 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 MED18Q9BUE0 208 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 MMP27Q9H306 513 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 GP6Q9HCN6 339 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 GLRX2Q9NS18 164 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 UPB1Q9UBR1 384 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 CLEC4AQ9UMR7 237 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 UGT2A1Q9Y4X1 527 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 LHFPL6Q9Y693 200 aa13.18□□□□□ -0.3
GTF2F1-202ENST00000593678 CFAP47Q6ZTR5 3102 aa13.17□□□□□ -0.3
GTF2F1-202ENST00000593678 A0A1B0GTH9 108 aa13.17□□□□□ -0.3
GTF2F1-202ENST00000593678 OR14I1A6ND48 311 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms