RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 INIPQ9NRY2 104 aa7.4□□□□□ -1.22
PDPN-209ENST00000510906 AP3M1Q9Y2T2 418 aa7.4□□□□□ -1.22
PDPN-209ENST00000510906 CMAHPQ9Y471 501 aa7.4□□□□□ -1.22
PDPN-209ENST00000510906 FKBP7Q9Y680 259 aa7.4□□□□□ -1.22
PDPN-209ENST00000510906 ARFGEF3Q5TH69 2177 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 IGKV1D-43A0A0B4J1Z2 117 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 VWC2LB2RUY7 222 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 ATP8B1O43520 1251 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 TLX2O43763 284 aaPredicted RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 TMEM127O75204 238 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 PRSS23O95084 383 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 SLC2A10O95528 541 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 SERPINA1P01009 418 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 IFNW1P05000 195 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 CSF3P09919 207 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 OR8G3PP0DMU2 310 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 DRD4P21917 467 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 USF1P22415 310 aaPredicted RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 NR4A2P43354 598 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 DAP3P51398 398 aaKnown RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 ZNF84P51523 738 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 PSME3P61289 254 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 VLDLRP98155 873 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 FMODQ06828 376 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 TOP3AQ13472 1001 aaPredicted RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 GGTLC2Q14390 218 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 TRAM2Q15035 370 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 IFI44LQ53G44 452 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 ALG10Q5BKT4 473 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 ARMC4Q5T2S8 1044 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 C6orf52Q5T4I8 152 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 HACD2Q6Y1H2 254 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 TSEN54Q7Z6J9 526 aaKnown RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 IGFN1Q86VF2 1251 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 NRMQ8IXM6 262 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 PAQR4Q8N4S7 273 aaPredicted RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 RBM15BQ8NDT2 890 aaKnown RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 GEMIN6Q8WXD5 167 aaKnown RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 HDAC2Q92769 488 aaKnown RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 MRPL24Q96A35 216 aaKnown RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 NMD3Q96D46 503 aaKnown RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 BPIFA2Q96DR5 249 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 FOXN4Q96NZ1 517 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 SEPHS2Q99611 448 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 PIMREGQ9BSJ6 248 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 FNDC11Q9BVV2 318 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 MRPL37Q9BZE1 423 aaKnown RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 TPK1Q9H3S4 243 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 DENND2DQ9H6A0 471 aaPredicted RBP7.39□□□□□ -1.23
PDPN-209ENST00000510906 DYNLRB1Q9NP97 96 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 FZR1Q9UM11 496 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 UGT2A1Q9Y4X1 527 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 NOTCH1P46531 2555 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 RTTNQ86VV8 2226 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 CR1P17927 2039 aa7.39□□□□□ -1.23
PDPN-209ENST00000510906 NBEAL2Q6ZNJ1 2754 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 TRAV27A0A087WT01 109 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 A0A087WUU8 490 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 IGHV4-61A0A0C4DH41 118 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 NPIPB13A6NJU9 1138 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 A8MV72 311 aaPredicted RBP7.38□□□□□ -1.23
PDPN-209ENST00000510906 EFCAB9A8MZ26 197 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 NPIPB4C9JG80 1138 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 SNX3O60493 162 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 ENTPD5O75356 428 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 FARS2O95363 451 aaKnown RBP7.38□□□□□ -1.23
PDPN-209ENST00000510906 STAMBPO95630 424 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 SERPINA5P05154 406 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 ADRA2AP08913 450 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 IGHV4-31P0DP07 118 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 CCL2P13500 99 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 CDAP32320 146 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 IFNA8P32881 189 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 GLRXP35754 106 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 ZNF133P52736 654 aaPredicted RBP7.38□□□□□ -1.23
PDPN-209ENST00000510906 CTXN1P60606 82 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 GALK2Q01415 458 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 CD47Q08722 323 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 FHL1Q13642 323 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 MAD2L1BPQ15013 274 aaPredicted RBP7.38□□□□□ -1.23
PDPN-209ENST00000510906 C10orf128Q5T292 105 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 GKAP1Q5VSY0 366 aaPredicted RBP7.38□□□□□ -1.23
PDPN-209ENST00000510906 TBPL2Q6SJ96 375 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 SLC16A14Q7RTX9 510 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 HDDC2Q7Z4H3 204 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 LRP11Q86VZ4 500 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 LRRC18Q8N456 261 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 CLDN22Q8N7P3 220 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 LRRC75AQ8NAA5 344 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 SLC30A7Q8NEW0 376 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 OR13C2Q8NGS9 318 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 OR51A7Q8NH64 312 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 FAM162AQ96A26 154 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 KCTD14Q9BQ13 255 aaPredicted RBP7.38□□□□□ -1.23
PDPN-209ENST00000510906 BPESC1Q9GZL8 116 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 RAB1BQ9H0U4 201 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 TXNIPQ9H3M7 391 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 RNF121Q9H920 327 aa7.38□□□□□ -1.23
PDPN-209ENST00000510906 MYEF2Q9P2K5 600 aaKnown RBP7.38□□□□□ -1.23
PDPN-209ENST00000510906 ABCD2Q9UBJ2 740 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms