RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 FAM183AA6NL82 134 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 HPGDSO60760 199 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ENTPD6O75354 484 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 KHDRBS3O75525 346 aaKnown RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 UPK1BO75841 260 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SERPINA3P01011 423 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SPP1P10451 314 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 CCL4P13236 92 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 NQO2P16083 231 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ANXA7P20073 488 aaKnown RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 PCMT1P22061 227 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 PSMB9P28065 219 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 APOBEC3AP31941 199 aaPredicted RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 GGT2P36268 569 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SNRPEP62304 92 aaKnown RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 EPS8Q12929 822 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 GAGE1Q13065 139 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 IKZF1Q13422 519 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 IL18R1Q13478 541 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SERTAD2Q14140 314 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 KEAP1Q14145 624 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SLC35F1Q5T1Q4 408 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 MED25Q71SY5 747 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 LIX1LQ8IVB5 337 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 MISPQ8IVT2 679 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 D2HGDHQ8N465 521 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ADPRHL1Q8NDY3 354 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 C17orf47Q8NEP4 570 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SMAP2Q8WU79 429 aaPredicted RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 FAR1Q8WVX9 515 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 HAS2Q92819 552 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 GGHQ92820 318 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 MOAP1Q96BY2 351 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SLC41A3Q96GZ6 507 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 PRRC1Q96M27 445 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SFXN2Q96NB2 322 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 DIRC2Q96SL1 478 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ADOQ96SZ5 270 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 NDC1Q9BTX1 674 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 C1QTNF6Q9BXI9 259 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 BEX2Q9BXY8 128 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 DPH1Q9BZG8 443 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 VN1R1Q9GZP7 353 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 RERGLQ9H628 205 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 RNF167Q9H6Y7 350 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 FTSJ1Q9UET6 329 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 KCNG2Q9UJ96 466 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ELF5Q9UKW6 265 aaPredicted RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 WIF1Q9Y5W5 379 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 R4GN57 208 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 KIF26BQ2KJY2 2108 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ADAMTS9Q9P2N4 1935 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 A0A087WV62 115 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ZC3H12DA2A288 527 aaKnown RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 CDHR4A6H8M9 788 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 NPIPA2E9PIF3 369 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 TEX46H3BTG2 121 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SURF4O15260 269 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF354AO60765 605 aaPredicted RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ADAP1O75689 374 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 CPNE6O95741 557 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 CLPSP04118 112 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 NGFRP08138 427 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 GABRB1P18505 474 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 PSMB6P28072 239 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 DDTP30046 118 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 CD96P40200 585 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 PTGFRP43088 359 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 GIPRP48546 466 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 GPR143P51810 404 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 TMBIM6P55061 237 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ST3GAL4Q11206 333 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 LARS2Q15031 903 aaKnown RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 CD226Q15762 336 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 HYAL4Q2M3T9 481 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 METAP1DQ6UB28 335 aaPredicted RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 HSDL2Q6YN16 418 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 QSOX2Q6ZRP7 698 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 LINGO2Q7L985 606 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 KANSL1Q7Z3B3 1105 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 VASH2Q86V25 355 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 RAB43Q86YS6 212 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SLC30A8Q8IWU4 369 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF615Q8N8J6 731 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 B3GNT7Q8NFL0 401 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 STXBP6Q8NFX7 210 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 OR51A7Q8NH64 312 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 OR4C6Q8NH72 309 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SLC41A2Q96JW4 573 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SPATA5L1Q9BVQ7 753 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 FUNDC2Q9BWH2 189 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SUCNR1Q9BXA5 334 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ARRDC1-AS1Q9H2J1 176 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 DUSP21Q9H596 190 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 METTL8Q9H825 291 aaKnown RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 ZMAT3Q9HA38 289 aaKnown RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 SERTAD3Q9UJW9 196 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 MRPS33Q9Y291 106 aaKnown RBP5.57□□□□□ -1.52
SSBP1-213ENST00000496622 MSRB2Q9Y3D2 182 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 CEP192Q8TEP8 1941 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms