RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 DMDP11532 3685 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 KIF26BQ2KJY2 2108 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 IGLV1-36A0A0B4J1U3 117 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 LGALS8O00214 317 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PLPP3O14495 311 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ADAM10O14672 748 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 YKT6O15498 198 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 DOK2O60496 412 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ECDO95905 644 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 AFF3P51826 1226 aaKnown RBP16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 EFNB2P52799 333 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 RAG2P55895 527 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZP1P60852 638 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF704Q6ZNC4 412 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MCHR2Q969V1 340 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 DUSP15Q9H1R2 295 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SESN1Q9Y6P5 492 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TRAV20A0A0B4J274 112 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SOX1O00570 391 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ARPC1BO15143 372 aaKnown RBP16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 LDOC1O95751 146 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SULT1A3P0DMM9 295 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SULT1A4P0DMN0 295 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PUDPQ08623 228 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 Q6ZTK2 550 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 LUZP2Q86TE4 346 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF679Q8IYX0 411 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ARL5BQ96KC2 179 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MRI1Q9BV20 369 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 REG4Q9BYZ8 158 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SEMA4CQ9C0C4 833 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 STEAP1Q9UHE8 339 aa16.49■□□□□ 0.23
CHRFAM7A-202ENST00000397827 A0A1B0GTQ1 180 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ANKRD20A5PA0PJZ0 165 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PHYHO14832 338 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF432O94892 652 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 AHSA1O95433 338 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MFGE8Q08431 387 aaPredicted RBP16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF227Q86WZ6 799 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CARFQ8N187 725 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 COA3Q9Y2R0 106 aaPredicted RBP16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ETV7Q9Y603 341 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TRIOBPQ9H2D6 2365 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 OR6C76A6NM76 312 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 LINC00587B1AMM8 73 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SULT1B1O43704 296 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TOXO94900 526 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ITGA5P08648 1049 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 AP3S2P59780 193 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 LINC00303Q3SY05 128 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SLC18B1Q6NT16 456 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 KRT77Q7Z794 578 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 STPG2Q8N412 459 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CLRN3Q8NCR9 226 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SEMA5BQ9P283 1151 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SUSD2Q9UGT4 822 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 VDAC3Q9Y277 283 aa16.48■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ACOT7O00154 380 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TIAF1O95411 115 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CSRP1P21291 193 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SELENOPP49908 381 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ASPHD2Q6ICH7 369 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SLC25A25Q6KCM7 469 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 FGD2Q7Z6J4 655 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 WDFY1Q8IWB7 410 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 APCDD1LQ8NCL9 501 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PLPP5Q8NEB5 264 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 C8orf44Q96CB5 159 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 VSX1Q9NZR4 365 aaPredicted RBP16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CPAMD8Q8IZJ3 1885 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MEIKINA0A087WXM9 373 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MFSD2BA6NFX1 497 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 RAD52P43351 418 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 FMODQ06828 376 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 EIF2B1Q14232 305 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 FIP1L1Q6UN15 594 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 PLPP7Q8NBV4 271 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 IER2Q9BTL4 223 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ABHD6Q9BV23 337 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 NOX3Q9HBY0 568 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 DLL4Q9NR61 685 aa16.47■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TMEM127O75204 238 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 GLSO94925 669 aaPredicted RBP16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 GLAP06280 429 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CAMK2DQ13557 499 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 YOD1Q5VVQ6 348 aaPredicted RBP16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF574Q6ZN55 896 aaPredicted RBP16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 NDUFAF7Q7L592 441 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 BIVMQ86UB2 503 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 RNF128Q8TEB7 428 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 DNASE2BQ8WZ79 361 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 NXPE2Q96DL1 559 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ZNF768Q9H5H4 540 aaKnown RBP16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 MED11Q9P086 117 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 TNRC18O15417 2968 aaPredicted RBP16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 CACNA1EQ15878 2313 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SHISA8B8ZZ34 492 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 ALDOBP05062 364 aa16.46■□□□□ 0.23
CHRFAM7A-202ENST00000397827 SMAD2Q15796 467 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms