RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ALKBH1Q13686 389 aaKnown RBP23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 C3AR1Q16581 482 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 FOXL2NBQ6ZUU3 175 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 GPR137CQ8N3F9 429 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 OR2AJ1Q8NGZ0 328 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 RBM24Q9BX46 236 aaKnown RBP23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 C1orf198Q9H425 327 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 A3GALT2U3KPV4 340 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 SPTBN4Q9H254 2564 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 TNRC6AQ8NDV7 1962 aaKnown RBP23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 ZNF724A8MTY0 619 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 NANOS3P60323 173 aaKnown RBP23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 RIPPLY2Q5TAB7 128 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 FDX2Q6P4F2 183 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 PAMR1Q6UXH9 720 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 NELFAQ9H3P2 528 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 BCO1Q9HAY6 547 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 EMC7Q9NPA0 242 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 PMF1-BGLAPU3KQ54 211 aa23.26■■□□□ 1.31
ATPAF1-202ENST00000371937 AQP7O14520 342 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 MRPL33O75394 65 aaKnown RBP23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 CDRT1O95170 752 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 PDGFAP04085 211 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 MSR1P21757 451 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 UCNP55089 124 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 ZNF404Q494X3 552 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 ZNF544Q6NX49 715 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 MCEMP1Q8IX19 187 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 MCFD2Q8NI22 146 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 RNF133Q8WVZ7 376 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 PRDM14Q9GZV8 571 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 MMP27Q9H306 513 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 ZNF281Q9Y2X9 895 aa23.25■■□□□ 1.31
ATPAF1-202ENST00000371937 SC5DO75845 299 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 INSL4Q14641 139 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 SGCAQ16586 387 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 ACSM3Q53FZ2 586 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 CORO6Q6QEF8 472 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 SPATC1Q76KD6 591 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 OR2G2Q8NGZ5 317 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 PDCD1LG2Q9BQ51 273 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 SNTG1Q9NSN8 517 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 FRRS1LQ9P0K9 344 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 B3GNT3Q9Y2A9 372 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 ZNF175Q9Y473 711 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 LRP12Q9Y561 859 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 LHFPL6Q9Y693 200 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 FRYQ5TBA9 3013 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 SDC2P34741 201 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 RORCP51449 518 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 YIF1BQ5BJH7 314 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 RPUSD3Q6P087 351 aaKnown RBP23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 RHOUQ7L0Q8 258 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 CEACAM19Q7Z692 300 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 RBMXL3Q8N7X1 1067 aaKnown RBP23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 OR5AK2Q8NH90 309 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 CPT1CQ8TCG5 803 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 HSD17B8Q92506 261 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 TAAR6Q96RI8 345 aa23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 GDF2Q9UK05 429 aaPredicted RBP23.24■■□□□ 1.31
ATPAF1-202ENST00000371937 PIEZO1Q92508 2521 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 URB1O60287 2271 aaKnown RBP23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 OR6C65A6NJZ3 312 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 GATBO75879 557 aaKnown RBP23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 ZFPL1O95159 310 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 YES1P07947 543 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 TMPRSS3P57727 454 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 INAQ16352 499 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 OR7E24Q6IFN5 339 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 SIAH3Q8IW03 269 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 ZFAND2BQ8WV99 257 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 SARAFQ96BY9 339 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 SLAMF6Q96DU3 332 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 CRLF2Q9HC73 371 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 PLSCR2Q9NRY7 297 aa23.23■■□□□ 1.31
ATPAF1-202ENST00000371937 CACNA1CQ13936 2221 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 SLC22A20A6NK97 555 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 TMEM212A6NML5 194 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 H2BFMP0C1H6 154 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 FCGR2AP12318 317 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 OPRL1P41146 370 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 CCR9P51686 369 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 MRPS34P82930 218 aaKnown RBP23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 MXD1Q05195 221 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 TBR1Q16650 682 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 MOGQ16653 247 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 TUSC5Q8IXB3 177 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 SLC25A46Q96AG3 418 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 MAP6Q96JE9 813 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 NXF2Q9GZY0 626 aaKnown RBP23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 COMMD4Q9H0A8 199 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 TPK1Q9H3S4 243 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 CENPMQ9NSP4 180 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 ASH2LQ9UBL3 628 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 CASKO14936 926 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 NPR2P20594 1047 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 RPS11P62280 158 aaKnown RBP eCLIP23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 TEX19Q8NA77 164 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 PHYHIPQ92561 330 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms