RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 CREBL2O60519 120 aaPredicted RBP12.14□□□□□ -0.47
CLK3-215ENST00000564353 CTAG2O75638 210 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 GLSO94925 669 aaPredicted RBP12.14□□□□□ -0.47
CLK3-215ENST00000564353 ZNF35P13682 527 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 SLC25A1P53007 311 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 SERTAD2Q14140 314 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 GLYATL3Q5SZD4 288 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 FAM69AQ5T7M9 428 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 CDH24Q86UP0 819 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 LINC00518Q8N0U6 118 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 JAGN1Q8N5M9 183 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 OTOSQ8NHW6 89 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 COQ8AQ8NI60 647 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 STK35Q8TDR2 534 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 SFXN2Q96NB2 322 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 FOXQ1Q9C009 403 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 ZNF576Q9H609 170 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 B3GNT2Q9NY97 397 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 STEAP1Q9UHE8 339 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 TMED7-TICAM2A0A0A6YYA0 188 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 IGKV1D-43A0A0B4J1Z2 117 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 FITM1A5D6W6 292 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 ECDO95905 644 aaPredicted RBP12.14□□□□□ -0.47
CLK3-215ENST00000564353 BGLAPP02818 100 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 CAPZA2P47755 286 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 AP3S2P59780 193 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 IL10RAQ13651 578 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 NKPD1Q17RQ9 610 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 C4orf46Q504U0 113 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 METTL11BQ5VVY1 283 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 SLC46A1Q96NT5 459 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 PTDSS2Q9BVG9 487 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 SYNDIG1Q9H7V2 258 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 TMED7Q9Y3B3 224 aa12.14□□□□□ -0.47
CLK3-215ENST00000564353 TRBV5-5A0A0J9YX44 114 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 TLCD2A6NGC4 264 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 GGT3PA6NGU5 568 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 GP1BBP13224 206 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 FASLGP48023 281 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 CCR5P51681 352 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 FBXW4P57775 412 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 OPCMLQ14982 345 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 MOGAT2Q3SYC2 334 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 BAIAP2L2Q6UXY1 529 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 GKN2Q86XP6 184 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 ZNF440Q8IYI8 595 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 FAM3DQ96BQ1 224 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 CMBLQ96DG6 245 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 LRFN5Q96NI6 719 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 CMKLR1Q99788 373 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 UBQLN2Q9UHD9 624 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 FBXO4Q9UKT5 387 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 NUP50Q9UKX7 468 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 RPS10-NUDT3A0A1W2PQS6 291 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 PRSS37A4D1T9 235 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 L7N2F9 121 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 SIGLEC5O15389 551 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 PDGFAP04085 211 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 IGKV3-11P04433 115 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 BTF3P20290 206 aaKnown RBP12.13□□□□□ -0.47
CLK3-215ENST00000564353 MAPK3P27361 379 aaPredicted RBP12.13□□□□□ -0.47
CLK3-215ENST00000564353 SIGLEC14Q08ET2 396 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 INPP5JQ15735 1006 aaPredicted RBP12.13□□□□□ -0.47
CLK3-215ENST00000564353 LRRC37A5PQ49AS3 106 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 SCGB2B2Q4G0G5 96 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 FAM209BQ5JX69 171 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 GPR139Q6DWJ6 353 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 ADGRG3Q86Y34 549 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 MUC20Q8N307 709 aaPredicted RBP12.13□□□□□ -0.47
CLK3-215ENST00000564353 OR4S1Q8NGB4 309 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 LHFPL5Q8TAF8 219 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 SPACA5Q96QH8 159 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
CLK3-215ENST00000564353 ABHD6Q9BV23 337 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 VN1R1Q9GZP7 353 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 CYB5R1Q9UHQ9 305 aa12.13□□□□□ -0.47
CLK3-215ENST00000564353 FRG2CA6NGY1 282 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 RAB40ALP0C0E4 278 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 CALCBP10092 127 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 NME1P15531 152 aaKnown RBP12.12□□□□□ -0.47
CLK3-215ENST00000564353 FOXK1P85037 733 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 SLC17A1Q14916 467 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 OR7A5Q15622 319 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 COL28A1Q2UY09 1125 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 ARSKQ6UWY0 536 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 ACBD4Q8NC06 268 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 RPS4Y2Q8TD47 263 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 RAB40AQ8WXH6 277 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 HGDQ93099 445 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 CXorf58Q96LI9 332 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 WWTR1Q9GZV5 400 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 ADAM19Q9H013 955 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 EXO5Q9H790 373 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 NPDC1Q9NQX5 325 aaPredicted RBP12.12□□□□□ -0.47
CLK3-215ENST00000564353 RDH8Q9NYR8 311 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 MED11Q9P086 117 aa12.12□□□□□ -0.47
CLK3-215ENST00000564353 AKAP7Q9P0M2 348 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms