RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 OR2G2Q8NGZ5 317 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 OR5AK2Q8NH90 309 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 RNF128Q8TEB7 428 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ZCCHC14Q8WYQ9 949 aaKnown RBP13.1□□□□□ -0.31
VPS33B-205ENST00000556096 SIGLEC12Q96PQ1 595 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ABHD6Q9BV23 337 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 MROQ9BYG7 248 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ELOVL3Q9HB03 270 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ING1Q9UK53 422 aaPredicted RBP13.1□□□□□ -0.31
VPS33B-205ENST00000556096 APC2O95996 2303 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ALPK2Q86TB3 2170 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 PINLYPA6NC86 204 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 TMEM212A6NML5 194 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 OR4C45A6NMZ5 311 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ZNF726A6NNF4 738 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 KLK10O43240 276 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 TMCC2O75069 709 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ZNF432O94892 652 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 WDPCPO95876 746 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 NR2C1P13056 603 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 LAP3P28838 519 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 RASGEF1BQ0VAM2 473 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 CAMK2DQ13557 499 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 OR1C1Q15619 314 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 SLC25A47Q6Q0C1 308 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 DEGS2Q6QHC5 323 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 LRRC69Q6ZNQ3 347 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 DCDC5Q6ZRR9 648 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 OR52N5Q8NH56 324 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 HSD17B8Q92506 261 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 CCDC32Q9BV29 185 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ZCCHC4Q9H5U6 513 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 V9GYH0 126 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 A0A0G2JK05 382 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 ZNF254O75437 659 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 F10P00742 488 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 KLK2P20151 261 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 RAB3BP20337 219 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 GDF1P27539 372 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 EIF2S3P41091 472 aaKnown RBP13.09□□□□□ -0.31
VPS33B-205ENST00000556096 RRADP55042 308 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 HSD17B12Q53GQ0 312 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 LRRN1Q6UXK5 716 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 ESPNLQ6ZVH7 1005 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 CREB3L2Q70SY1 520 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 KRT77Q7Z794 578 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-205ENST00000556096 LYSMD2Q8IV50 215 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 GALNT16Q8N428 558 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 RGP1Q92546 391 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-205ENST00000556096 C4orf45Q96LM5 186 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 SFXN2Q96NB2 322 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 OR14A2Q96R54 314 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 SF3B5Q9BWJ5 86 aaKnown RBP13.09□□□□□ -0.31
VPS33B-205ENST00000556096 COMMD3Q9UBI1 195 aa13.09□□□□□ -0.31
VPS33B-205ENST00000556096 TRBV5-5A0A0J9YX44 114 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 TNFSF11O14788 317 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 TRAPPC6AO75865 159 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 WT1P19544 449 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 RIDAP52758 137 aaKnown RBP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 GFRA1P56159 465 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 CLDN17P56750 224 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 WIPI1Q5MNZ9 446 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 ZNF544Q6NX49 715 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 SFXN4Q6P4A7 337 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 LINC00696Q6ZRV3 163 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 GGNQ86UU5 652 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 CENPSQ8N2Z9 138 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 OR10H5Q8NGA6 315 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 ST7LQ8TDW4 575 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 C11orf40Q8WZ69 217 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 MCHR2Q969V1 340 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 DERL3Q96Q80 235 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 SDHCQ99643 169 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 COMMD4Q9H0A8 199 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 ABCB10Q9NRK6 738 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 B4GALT7Q9UBV7 327 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 DMXL2Q8TDJ6 3036 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 ANKRD61A6NGH8 418 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 NPIPA2E9PIF3 369 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 NPIPA3F8WFD2 350 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 PIN1P1O15428 100 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 TBX1O43435 398 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 SLC19A2O60779 497 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 HPNP05981 417 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 PTBP1P26599 531 aaKnown RBP eCLIP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 MAPK3P27361 379 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 THBS2P35442 1172 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 ZNF133P52736 654 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-205ENST00000556096 CLDN20P56880 219 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 CARD18P57730 90 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 OXA1LQ15070 435 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 KCNMB1Q16558 191 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 Q499Y3 187 aa13.08□□□□□ -0.32
VPS33B-205ENST00000556096 XKRXQ6PP77 449 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms