RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 KRT35Q92764 455 aa0.02□□□□□ -2.41
RNU6-1338P-201ENST00000516328 C7orf34Q96L11 122 aa0.02□□□□□ -2.41
RNU6-1338P-201ENST00000516328 IGF2BP2-AS1Q96M15 143 aa0.02□□□□□ -2.41
RNU6-1338P-201ENST00000516328 P2RX4Q99571 388 aa0.02□□□□□ -2.41
RNU6-1338P-201ENST00000516328 RSG1Q9BU20 258 aa0.02□□□□□ -2.41
RNU6-1338P-201ENST00000516328 DPH5Q9H2P9 285 aa0.02□□□□□ -2.41
RNU6-1338P-201ENST00000516328 MYO9BQ13459 2157 aa0.02□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ICE1Q9Y2F5 2266 aa0.02□□□□□ -2.41
RNU6-1338P-201ENST00000516328 FAM47DPA6NHR8 397 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 HSD17B6O14756 317 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 OR1F1O43749 312 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 NEBLO76041 1014 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 DRD5P21918 477 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 RORCP51449 518 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ATP1B3P54709 279 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 NUCB2P80303 420 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ACTN3Q08043 901 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 PPIDQ08752 370 aaKnown RBP0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 SLC9A3R2Q15599 337 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 C1orf220Q5T0J3 134 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 THEM4Q5T1C6 240 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 TRIM40Q6P9F5 258 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CATSPER4Q7RTX7 472 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CCDC91Q7Z6B0 441 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 OR1F12Q8NHA8 337 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 TGM7Q96PF1 710 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 SECISBP2Q96T21 854 aaKnown RBP0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 MRPL13Q9BYD1 178 aaKnown RBP0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 LINC00574Q9H8X3 128 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 KCNIP3Q9Y2W7 256 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ATP6V0A2Q9Y487 856 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 OR10H1Q9Y4A9 318 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 LOXHD1Q8IVV2 1947 aa0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 FSIP2Q5CZC0 6907 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 IGHV3-49A0A0A0MS15 119 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 SCELO95171 688 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 MT-ATP6P00846 226 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CALM1P0DP23 149 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CALM2P0DP24 149 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CALM3P0DP25 149 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ATF6P18850 670 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 QARSP47897 775 aaKnown RBP0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 UGT2B15P54855 530 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 UBE2NP61088 152 aaKnown RBP0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 IRX3P78415 501 aaPredicted RBP0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CDK5Q00535 292 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ZNF92Q03936 586 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CDH17Q12864 832 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 MALRD1Q5VYJ5 2156 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 TMEM135Q86UB9 458 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CCDC50Q8IVM0 306 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 PUSL1Q8N0Z8 303 aaKnown RBP0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 FAM133AQ8N9E0 248 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 SLC13A3Q8WWT9 602 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 EMG1Q92979 244 aaKnown RBP0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 TMEM54Q969K7 222 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 TRIM44Q96DX7 344 aaPredicted RBP0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 C14orf79Q96F83 325 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CABS1Q96KC9 395 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CLCC1Q96S66 551 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 NPY6RQ99463 290 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 RBBP8Q99708 897 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 MEAF6Q9HAF1 191 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 FETUBQ9UGM5 382 aa0□□□□□ -2.41
RNU6-1338P-201ENST00000516328 D6RAR5 112 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 K7EMT4 169 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 FSTL3O95633 263 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CPSF4O95639 269 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CTSGP08311 255 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CGB7P0DN87 165 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CCNB1P14635 433 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 FUT1P19526 365 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 RAB3BP20337 219 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 HMGB2P26583 209 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CDKN1BP46527 198 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ACOT2P49753 483 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 NUTF2P61970 127 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CCNA1P78396 465 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 CDK16Q00536 496 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 PJVKQ0ZLH3 352 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 C1orf61Q13536 156 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 GANABQ14697 944 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ZNF141Q15928 474 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 SP6Q3SY56 376 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 PTPN20Q4JDL3 420 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 YIF1BQ5BJH7 314 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 C10orf120Q5SQS8 335 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 AVPI1Q5T686 147 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ANKRD22Q5VYY1 191 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ARMC3Q5W041 872 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 SPECC1LQ69YQ0 1117 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 ZNF470Q6ECI4 717 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 METTL13Q8N6R0 699 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 HSD17B11Q8NBQ5 300 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 OR5T1Q8NG75 326 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 SPRYD4Q8WW59 207 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 MAIP1Q8WWC4 291 aa-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.01□□□□□ -2.41
RNU6-1338P-201ENST00000516328 NTAN1Q96AB6 310 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms