RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C YHR054CP38780 354 aa7.84□□□□□ -1.15
UME1YPL139C YGR237CP50089 785 aa7.84□□□□□ -1.15
UME1YPL139C MLH2Q07980 695 aa7.84□□□□□ -1.15
UME1YPL139C FAL1Q12099 399 aaKnown RBP7.84□□□□□ -1.15
UME1YPL139C APM4Q99186 491 aa7.84□□□□□ -1.15
UME1YPL139C TRS33Q99394 268 aa7.84□□□□□ -1.15
UME1YPL139C TPK1P06244 397 aa7.84□□□□□ -1.16
UME1YPL139C HAP2P06774 265 aa7.84□□□□□ -1.16
UME1YPL139C SNF1P06782 633 aaKnown RBP7.84□□□□□ -1.16
UME1YPL139C SPE1P08432 466 aa7.84□□□□□ -1.16
UME1YPL139C MNR2P35724 969 aa7.84□□□□□ -1.16
UME1YPL139C YKT6P36015 200 aaKnown RBP7.84□□□□□ -1.16
UME1YPL139C POL31P46957 487 aa7.84□□□□□ -1.16
UME1YPL139C NUT1P53114 1132 aa7.84□□□□□ -1.16
UME1YPL139C YGR130CP53278 816 aa7.84□□□□□ -1.16
UME1YPL139C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.84□□□□□ -1.16not detected
UME1YPL139C DON1Q05610 365 aa7.84□□□□□ -1.16
UME1YPL139C SPP382Q06411 708 aaPredicted RBP7.84□□□□□ -1.16
UME1YPL139C CDC73Q06697 393 aa7.84□□□□□ -1.16
UME1YPL139C MED1Q12321 566 aa7.84□□□□□ -1.16
UME1YPL139C CCH1P50077 2039 aa7.83□□□□□ -1.16
UME1YPL139C FAB1P34756 2278 aa7.83□□□□□ -1.16
UME1YPL139C GAL80P04387 435 aa7.83□□□□□ -1.16
UME1YPL139C KEX1P09620 729 aa7.83□□□□□ -1.16
UME1YPL139C CHS2P14180 963 aa7.83□□□□□ -1.16
UME1YPL139C APE1P14904 514 aa7.83□□□□□ -1.16
UME1YPL139C PIN4P34217 668 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
UME1YPL139C YKL097CP34245 136 aa7.83□□□□□ -1.16
UME1YPL139C YTA12P40341 825 aa7.83□□□□□ -1.16
UME1YPL139C CHS1P08004 1131 aa7.82□□□□□ -1.16
UME1YPL139C CDC42P19073 191 aa7.82□□□□□ -1.16
UME1YPL139C SCJ1P25303 377 aa7.82□□□□□ -1.16
UME1YPL139C RAD27P26793 382 aa7.82□□□□□ -1.16
UME1YPL139C YBR056WP38081 501 aa7.82□□□□□ -1.16
UME1YPL139C DAS1P47005 663 aa7.82□□□□□ -1.16
UME1YPL139C YNR014WP53719 212 aa7.82□□□□□ -1.16
UME1YPL139C KRE33P53914 1056 aaKnown RBP7.82□□□□□ -1.16
UME1YPL139C RPL22AP05749 121 aaKnown RBP7.81□□□□□ -1.16
UME1YPL139C OM45P16547 393 aa7.81□□□□□ -1.16
UME1YPL139C RRT12P25381 491 aa7.81□□□□□ -1.16
UME1YPL139C PGS1P25578 521 aa7.81□□□□□ -1.16
UME1YPL139C MET22P32179 357 aa7.81□□□□□ -1.16
UME1YPL139C RPC25P35718 212 aa7.81□□□□□ -1.16
UME1YPL139C PSY4P38193 441 aa7.81□□□□□ -1.16
UME1YPL139C PEX28P38848 579 aa7.81□□□□□ -1.16
UME1YPL139C RVS167P39743 482 aaKnown RBP7.81□□□□□ -1.16
UME1YPL139C SIP5P40210 489 aaKnown RBP7.81□□□□□ -1.16
UME1YPL139C SLG1P54867 378 aa7.81□□□□□ -1.16
UME1YPL139C YML083CQ04526 418 aa7.81□□□□□ -1.16
UME1YPL139C YAP7Q08182 245 aa7.81□□□□□ -1.16
UME1YPL139C ATP1P07251 545 aaKnown RBP7.8□□□□□ -1.16
UME1YPL139C MAS1P10507 462 aa7.8□□□□□ -1.16
UME1YPL139C SSB1P11484 613 aaKnown RBP7.8□□□□□ -1.16
UME1YPL139C SLA2P33338 968 aa7.8□□□□□ -1.16
UME1YPL139C YKL023WP36103 277 aaKnown RBP7.8□□□□□ -1.16
UME1YPL139C KIC1P38692 1080 aa7.8□□□□□ -1.16
UME1YPL139C RIM4P38741 713 aa7.8□□□□□ -1.16
UME1YPL139C NPR3P38742 1146 aa7.8□□□□□ -1.16
UME1YPL139C BCD1P38772 366 aa7.8□□□□□ -1.16
UME1YPL139C SSB2P40150 613 aaKnown RBP7.8□□□□□ -1.16
UME1YPL139C MOB1P40484 314 aa7.8□□□□□ -1.16
UME1YPL139C SSL2Q00578 843 aa7.8□□□□□ -1.16
UME1YPL139C TBF1Q02457 562 aa7.8□□□□□ -1.16
UME1YPL139C CEF1Q03654 590 aaPredicted RBP7.8□□□□□ -1.16
UME1YPL139C PPM1Q04081 328 aa7.8□□□□□ -1.16
UME1YPL139C FMP25Q08023 583 aa7.8□□□□□ -1.16
UME1YPL139C YPR027CQ12079 277 aa7.8□□□□□ -1.16
UME1YPL139C SGT2Q12118 346 aaKnown RBP7.8□□□□□ -1.16
UME1YPL139C MNL2Q12205 849 aa7.8□□□□□ -1.16
UME1YPL139C MAK16P10962 306 aaPredicted RBP7.79□□□□□ -1.16
UME1YPL139C PDE1P22434 369 aa7.79□□□□□ -1.16
UME1YPL139C GSY2P27472 705 aa7.79□□□□□ -1.16
UME1YPL139C SNF7P39929 240 aaKnown RBP7.79□□□□□ -1.16
UME1YPL139C FYV8P46949 817 aaKnown RBP7.79□□□□□ -1.16
UME1YPL139C YNL011CP53980 444 aa7.79□□□□□ -1.16
UME1YPL139C ADA2Q02336 434 aa7.79□□□□□ -1.16
UME1YPL139C RLP24Q07915 199 aaKnown RBP7.79□□□□□ -1.16
UME1YPL139C ABP140Q08641 628 aaKnown RBP7.79□□□□□ -1.16
UME1YPL139C TMA16Q08687 178 aa7.79□□□□□ -1.16
UME1YPL139C RAD59Q12223 238 aa7.79□□□□□ -1.16
UME1YPL139C GIS3Q12418 502 aa7.79□□□□□ -1.16
UME1YPL139C YDL206WQ12424 762 aa7.79□□□□□ -1.16
UME1YPL139C RRD2Q12461 358 aa7.79□□□□□ -1.16
UME1YPL139C CBF2P32504 956 aa7.78□□□□□ -1.16
UME1YPL139C SWI3P32591 825 aa7.78□□□□□ -1.16
UME1YPL139C VPS24P36095 224 aaKnown RBP7.78□□□□□ -1.16
UME1YPL139C TBS1P38114 1094 aa7.78□□□□□ -1.16
UME1YPL139C DSF2P38213 736 aa7.78□□□□□ -1.16
UME1YPL139C FTR1P40088 404 aa7.78□□□□□ -1.16
UME1YPL139C MMF1P40185 145 aaKnown RBP7.78□□□□□ -1.16
UME1YPL139C ASG7P46993 209 aa7.78□□□□□ -1.16
UME1YPL139C CPR7P47103 393 aa7.78□□□□□ -1.16
UME1YPL139C ALT1P52893 592 aa7.78□□□□□ -1.16
UME1YPL139C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16 RIP-Chip
UME1YPL139C EBS1Q03466 884 aaKnown RBP7.78□□□□□ -1.16
UME1YPL139C HER2Q03557 464 aa7.78□□□□□ -1.16
UME1YPL139C LEA1Q08963 238 aaPredicted RBP7.78□□□□□ -1.16
UME1YPL139C HRT3Q12347 344 aa7.78□□□□□ -1.16
UME1YPL139C NAT1P12945 854 aaKnown RBP7.77□□□□□ -1.17
UME1YPL139C BET2P20133 325 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms